Pairwise Alignments

Query, 494 a.a., succinate dehydrogenase/fumarate reductase iron-sulfur subunit from Methanococcus maripaludis S2

Subject, 433 a.a., glycolate oxidase subunit (Fe-S) protein from Synechococcus elongatus PCC 7942

 Score =  120 bits (300), Expect = 1e-31
 Identities = 73/252 (28%), Positives = 122/252 (48%), Gaps = 23/252 (9%)

Query: 260 NEKMRVAFFTGCLVDFRLQEIGKSAIRVLNAHGVSVIIPKNQVCCGSPFIRTGQTDISES 319
           + + RV    GC+      E+  +AIRVL A+G  V+IP  Q CCG+     G+   ++ 
Sbjct: 183 DRRYRVGLLLGCVQRLFNPEVNAAAIRVLRANGCDVVIPPQQGCCGAVAHHQGEMQQAQD 242

Query: 320 LKKQNLEIFNKLNVDSVVTLCAGCGSTLK-------------NDYKEKKFKVMDITEVLV 366
           L +  +  F   N+D+++   +GCG TLK             +  ++   +V D+ E L 
Sbjct: 243 LARAVIRSFEAENLDAILVTASGCGHTLKHYGAILADDPEWCDRAQQLADRVQDVQEFLA 302

Query: 367 KVGL-IDYKPLD---ITVTYHDPCHLRRGQKVYLEPRKILESIPKLKFIEMEIPDQCCGA 422
            VGL     PL    + V Y D CH+  GQK+  +PR++L+ IP ++  E      CCG+
Sbjct: 303 TVGLTTPLHPLQEQPLVVVYQDACHMLHGQKIRNQPRQLLQQIPGIELREPVDAQLCCGS 362

Query: 423 GGGVRSGKPEVAEAIGKRKANMIYATDADYLITVCPFCEYHIRDSLTKYLKEHGLKKDIP 482
            G     +P +A  +G++KA  +  T A  + +    C   IR  L          KD+P
Sbjct: 363 AGIYNLLQPAIAAELGQQKARSLAETGAQMIASANIGCYVQIRHHL------QAQSKDLP 416

Query: 483 VMNIISLLDKVI 494
           V++ + ++D+ +
Sbjct: 417 VLHPLQIIDRAM 428