Pairwise Alignments

Query, 494 a.a., succinate dehydrogenase/fumarate reductase iron-sulfur subunit from Methanococcus maripaludis S2

Subject, 249 a.a., Protein of unknown function DUF224, cysteine-rich region (NCBI) from Rhodospirillum rubrum S1H

 Score = 94.7 bits (234), Expect = 3e-24
 Identities = 64/229 (27%), Positives = 105/229 (45%), Gaps = 19/229 (8%)

Query: 258 VENEKMRVAFFTGCLVDFRLQEIGKSAIRVLNAHGVSVIIPKNQVCCGSPFIRTGQTDIS 317
           V  +   V FF  CLVD    E G + + +L   G+ VI P  Q CCG P    G  D +
Sbjct: 5   VPEKPASVYFFATCLVDLFYPEAGLAGMTLLERQGIRVIFPPGQTCCGQPMRNNGWLDEA 64

Query: 318 ESLKKQNLEIFNKLNVDSVVTLCAGCGSTLKNDYKE-----------KKF--KVMDITEV 364
            ++ +Q ++ F K     +V     C   +   Y E           + F  +V ++T  
Sbjct: 65  RAIARQQIKTFPK--PIPIVVPSGSCAGMMHRHYPELFAGQPDEAEARAFAARVYELTWF 122

Query: 365 LV---KVGLIDYKPLDITVTYHDPCHLRRGQKVYLEPRKILESIPKLKFIEMEIPDQCCG 421
           LV   K+ L D  P  +TV +H  CH +R   V  EP  +L  +  +   ++E P++CCG
Sbjct: 123 LVHVCKLSLTDGGP-PVTVAFHASCHSQREMGVRGEPESLLAGLSNVTLAKLERPNECCG 181

Query: 422 AGGGVRSGKPEVAEAIGKRKANMIYATDADYLITVCPFCEYHIRDSLTK 470
            GG     +PE++ A+   K + +  + A  +++    C  +I+ +L K
Sbjct: 182 FGGAFSVRQPEISAAMVADKIDDLSKSGASEVLSGDCGCLMNIKGALEK 230