Pairwise Alignments

Query, 494 a.a., succinate dehydrogenase/fumarate reductase iron-sulfur subunit from Methanococcus maripaludis S2

Subject, 260 a.a., Succinate dehydrogenase/fumarate reductase iron-sulfur protein (NCBI) from Rhodospirillum rubrum S1H

 Score = 91.7 bits (226), Expect = 3e-23
 Identities = 60/207 (28%), Positives = 101/207 (48%), Gaps = 12/207 (5%)

Query: 22  GLTILDALEYINKTYGENIQFRSSCKAGQCGSCAVMINKKSKLACK---TKVEDNMIIEP 78
           G  +LDAL  I       + +R SC+ G CGSC++ I+  + LAC     +VE ++ I P
Sbjct: 56  GPMVLDALNKIKNEIDPTLTYRRSCREGICGSCSMNIDSNNSLACLKPIAEVEGDVEIYP 115

Query: 79  LEGFDVISDLVVDREPYYKKIGTLRNYIQKKNEKISEKELDGLKLYPDDLKDVKKIRGCI 138
           L    V+ DLV D    Y +   +  +++  +     KE       P++   +  +  CI
Sbjct: 116 LPHLPVVKDLVPDLTHIYAQYNAIEPWLKTDSPPPPAKE---RLQSPEERARLDGLWECI 172

Query: 139 DCLSCIAMCPARKYSN--YPGPTLMRQLARFAFDPKDEIDREK-EAFDE--NIYNCTTCG 193
            C  C   CP+  +++  Y GP ++ Q AR+ FD +DE   E+ +  D+   ++ C T  
Sbjct: 173 LCFCCQTSCPSYWWNSERYLGPAILLQAARWVFDSRDEATGERLDMLDDPFRLFRCHTIM 232

Query: 194 RCVEVCPKEIDIVHNAVEKLREKTFKK 220
            C   CPK ++    A+  L+ K F++
Sbjct: 233 NCTATCPKGLN-PGKAIADLKIKMFER 258