Pairwise Alignments

Query, 494 a.a., succinate dehydrogenase/fumarate reductase iron-sulfur subunit from Methanococcus maripaludis S2

Subject, 444 a.a., D-lactate dehydrogenase, iron-sulfur subunit GlcF (EC 1.1.99.6) (from data) from Phaeobacter inhibens DSM 17395

 Score = 94.0 bits (232), Expect = 1e-23
 Identities = 94/414 (22%), Positives = 165/414 (39%), Gaps = 76/414 (18%)

Query: 134 IRGCIDCLSCIAMCPARKYSNYPGPTLMRQLARFAFDPKDEIDREK---EAFDENIYNCT 190
           +R C+ C  C A CP  +     G  L     R  +  KD ++ E+       ++I  C 
Sbjct: 22  LRSCVHCGFCTATCPTYQVL---GDELDSPRGRI-YLIKDMLENERVPDAKTVKHIDRCL 77

Query: 191 TCGRCVEVCPKEIDIVHNAVEKLREKTFKKGYNLDSHLEVRKNVLSQ------------- 237
           +C  C+  CP  +  +H  V+  R     K YN        + +L++             
Sbjct: 78  SCLACMTTCPSGVHYMH-LVDHARAY-IDKHYNRPWSDRALRWLLARILPYPGRFRLALI 135

Query: 238 --------NRSVPKEKTSFLEEVSDEYIVE--------------NEKMRVAFFTGCLVDF 275
                    R VP  +   + +++  +I                  + RVA  TGC    
Sbjct: 136 GAKLAQPFKRLVPDARLRAMLDMAPRHIPPVSRNDDPQSFAAKAPRRKRVALMTGCAQKA 195

Query: 276 RLQEIGKSAIRVLNAHGVSVIIPKNQVCCGSPFIRTGQTDISESLKKQNLEIFNK----L 331
              +I  + IR+L   G  V++     CCG+     G+ + S +   +N+  +       
Sbjct: 196 LNTDINDATIRLLTRLGCEVVVAAGAGCCGALTHHMGREEESHATAAKNIRAWTDEIDGQ 255

Query: 332 NVDSVVTLCAGCGSTLKN------------DYKEKKFKVMDITEVLVKVGLIDYKPLDIT 379
            +D++V   +GCG+T+K+            D        MDI+E+L+++ L + +  + T
Sbjct: 256 GLDAIVINTSGCGTTVKDYGHMFRNDALAEDAARVSAIAMDISELLMQLDLPEGEDKETT 315

Query: 380 VTYHDPCHLRRGQKVYLEPRKILESIPKLKFIEMEIPDQ--CCGAGGGVRSGKPEVAEAI 437
           V YH  C L+ GQ++   P+ +L+   +  F  +E  D   CCG+ G     +PE++  +
Sbjct: 316 VAYHAACSLQHGQQIKTHPKTLLK---RAGFTVVEPADSHLCCGSAGTYNLLQPEISAEL 372

Query: 438 GKRKANMIYATDADYLITVCPFCEYHIRDSLTKYLKEHGLKKDIPVMNIISLLD 491
             RK   + A   D +      C   I           G   DIP+++ + LLD
Sbjct: 373 KARKVTSLEARQPDLIAAGNIGCMMQI-----------GSATDIPILHTVELLD 415



 Score = 30.8 bits (68), Expect = 1e-04
 Identities = 11/23 (47%), Positives = 15/23 (65%)

Query: 127 DLKDVKKIRGCIDCLSCIAMCPA 149
           D K VK I  C+ CL+C+  CP+
Sbjct: 66  DAKTVKHIDRCLSCLACMTTCPS 88



 Score = 24.3 bits (51), Expect = 0.009
 Identities = 10/32 (31%), Positives = 14/32 (43%)

Query: 169 FDPKDEIDREKEAFDENIYNCTTCGRCVEVCP 200
           F  K   D   +  +E + +C  CG C   CP
Sbjct: 5   FSEKQLRDPGTQRANEILRSCVHCGFCTATCP 36