Pairwise Alignments

Query, 494 a.a., succinate dehydrogenase/fumarate reductase iron-sulfur subunit from Methanococcus maripaludis S2

Subject, 235 a.a., succinate dehydrogenase, iron-sulfur protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 83.6 bits (205), Expect = 7e-21
 Identities = 55/191 (28%), Positives = 94/191 (49%), Gaps = 14/191 (7%)

Query: 23  LTILDALEYINKTYGENIQFRSSCKAGQCGSCAVMINKKSKLACKTKVE----DNMIIEP 78
           + +LDAL  + K     + FR SC+ G CGS  + +N K+ LAC T V       + I P
Sbjct: 33  MMVLDALIKL-KEKDPTLVFRRSCREGVCGSDGLNMNGKNGLACITPVSTFKGKKLEIRP 91

Query: 79  LEGFDVISDLVVDREPYYKKIGTLRNYIQKKNEKISEKELDGLKLYPDDLKDVKKIRGCI 138
           L G  V+ DLVVD   +YK+   ++ ++   +++ + + L      P+    +  +  CI
Sbjct: 92  LPGMPVVRDLVVDLTQFYKQYEKIKPFLINDDKQPAREHLQS----PEQRAHLDGLYECI 147

Query: 139 DCLSCIAMCPARKYS--NYPGPTLMRQLARFAFDPKDEIDREK-EAFDE--NIYNCTTCG 193
            C  C   CP+  ++   + GP+ +    RF  D +D    E+    D+  +++ C    
Sbjct: 148 MCACCSTACPSFWWNPDKFIGPSGLLHAYRFLIDSRDTATEERLSELDDAYSVFRCHGIM 207

Query: 194 RCVEVCPKEID 204
            CV+VCPK ++
Sbjct: 208 NCVDVCPKGLN 218