Pairwise Alignments

Query, 494 a.a., succinate dehydrogenase/fumarate reductase iron-sulfur subunit from Methanococcus maripaludis S2

Subject, 250 a.a., cysteine-rich domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 80.9 bits (198), Expect = 5e-20
 Identities = 57/230 (24%), Positives = 100/230 (43%), Gaps = 16/230 (6%)

Query: 256 YIVENEKMRVAFFTGCLVDFRLQEIGKSAIRVLNAHGVSVIIPKNQVCCGSPFIRTGQTD 315
           Y    +   V FF  CLVD    + G + IR+L   GV V+ P  Q CCG P   +G  D
Sbjct: 2   YTYPEDIKTVYFFGTCLVDMSFPDAGMAGIRLLQRAGVEVVFPAAQSCCGQPAYNSGFFD 61

Query: 316 ISESLKKQNLEIFNKLNVDSVVTLCAGCGSTLKNDYKE------KKFKVMDITEVLVKVG 369
            + ++  + +E F+  +   VV     C   ++  Y E        F+V   +E + ++G
Sbjct: 62  EARTVALRQVEAFSAHDWPIVVP-SGSCAGMMRFHYPELFAEAPDYFEVRRFSERVFELG 120

Query: 370 ---------LIDYKPLDITVTYHDPCHLRRGQKVYLEPRKILESIPKLKFIEMEIPDQCC 420
                      + K   I VT+H  CH  R        + ++  +  ++ +++    +CC
Sbjct: 121 DFLCNALHQTYEDKGAPIKVTWHSSCHAMREMGAVAAAKTLIGQLANVELVDLPYEYECC 180

Query: 421 GAGGGVRSGKPEVAEAIGKRKANMIYATDADYLITVCPFCEYHIRDSLTK 470
           G GG     +PE++ A+   K   I +T A  +++    C  +I  ++ K
Sbjct: 181 GFGGTFSIKQPELSGAMVSDKVANIRSTGAARVLSGDCGCLMNINGAMEK 230