Pairwise Alignments

Query, 514 a.a., 2-isopropylmalate synthase from Methanococcus maripaludis S2

Subject, 522 a.a., 2-isopropylmalate synthase (RefSeq) from Shewanella amazonensis SB2B

 Score =  338 bits (867), Expect = 3e-97
 Identities = 197/504 (39%), Positives = 294/504 (58%), Gaps = 19/504 (3%)

Query: 20  LPEKVRVFDTTLRDGEQTPGVSLMPDQKMDIAKNLSEIGVDAIEAGFPVSSEGEQESIKN 79
           + ++V +FDTTLRDGEQ    SL   +K+ +A  L  +GVD +E GFPVSS G+ ES++ 
Sbjct: 1   MSDRVIIFDTTLRDGEQALAASLSVKEKLQVALALERLGVDVMEVGFPVSSPGDFESVQT 60

Query: 80  ITSLGLDAEICGLARAVKKDIDVAIDCGVDS----IHTFIATSPLHREYKLKMSKEKIID 135
           I     ++ +C L+RA++KDID A      +    IHTFI+TS +H E KLK S ++++D
Sbjct: 61  IARHIKNSRVCALSRALEKDIDAAAQALSVAEQFRIHTFISTSNIHVESKLKRSFDQVLD 120

Query: 136 IAVESIEYIKEHGVIVEFSAEDATRTELDYLKEVYKKAVEAGADRINVPDTVGVMVPNSM 195
           +AV +++Y +     VEFS EDA RT +D L  + + A+ AGA  IN+PDTVG  VP+  
Sbjct: 121 MAVGAVKYARRFTDDVEFSCEDAGRTPIDNLCRMVEAAISAGARTINIPDTVGYTVPSEF 180

Query: 196 SYLIKELKNDI----KVPISVHCHNDFGIAVSNSVAAVEAGAEQVHCTVNGLGERAGNAS 251
             +I+ L N +    +  ISVHCH+D G++V+NS+AAV+AGA Q+ CTVNG+GERAGN S
Sbjct: 181 GGIIQTLFNRVPNIDQAVISVHCHDDLGLSVANSIAAVQAGARQIECTVNGIGERAGNCS 240

Query: 252 LEETVM---TLNMVYGINTNVNTKMLTKLSKLVSHYTGIKTQPNKAIVGENSFAHESGIH 308
           LEE  M   T   + G+ TN+N + + + S LVS    +  QPNKAIVG N+F H SGIH
Sbjct: 241 LEEIAMILATRKDMLGLYTNINAREIHRTSSLVSQLCNMPIQPNKAIVGSNAFTHSSGIH 300

Query: 309 AHGVLANALTYEPIDPEIVG-NRRRIVLGKHSGAHAIKSKLSEIGVEVGEIVSEEQFCEI 367
             G+L    TYE + PE +G NR  + +   SG H IK ++ E+G   G+   +  +   
Sbjct: 301 QDGMLKAQNTYEIMTPESIGLNRNNLNMTSRSGRHVIKHRMEEMGYGAGDYDMDTLYAAF 360

Query: 368 VERVKAIGDKGKIVTDADVMAIAEDITKRTLKSERIVDLEQFAVIT-GNHVLPTASVALK 426
           ++    + DK   V D D+ A+A    +   + +    +EQ  V +       TA+V ++
Sbjct: 361 LK----LADKKGQVFDYDLEALA--FMEAQAEDDDHYVMEQLVVQSDSTEGKATATVRMR 414

Query: 427 VKDKIYKTSELGVGPVDAALKAIQAAVGENIRLNEYNISAISGGTDAIAEVTVRLENQEK 486
           V D++   +  G GPVDAA  AI  A    I ++ Y + A   G +A+ +V +     ++
Sbjct: 415 VGDEVITEAATGNGPVDAAYNAIARATHRTINISSYKLGAKGEGQNALGQVDITARYDDR 474

Query: 487 EVIAKATGDDVVKASVEAVIDGIN 510
                    DVV+AS +A++  +N
Sbjct: 475 NFHGVGLATDVVEASAQALVHVMN 498