Pairwise Alignments

Query, 514 a.a., 2-isopropylmalate synthase from Methanococcus maripaludis S2

Subject, 522 a.a., 2-isopropylmalate synthase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  325 bits (832), Expect = 3e-93
 Identities = 196/504 (38%), Positives = 282/504 (55%), Gaps = 19/504 (3%)

Query: 20  LPEKVRVFDTTLRDGEQTPGVSLMPDQKMDIAKNLSEIGVDAIEAGFPVSSEGEQESIKN 79
           +  +V +FDTTLRDGEQ    SL   +K+ IA  L  +GVD +E GFPVSS G+ ES++ 
Sbjct: 1   MSNRVIIFDTTLRDGEQALAASLSVKEKLQIAMALERLGVDVMEVGFPVSSPGDFESVQT 60

Query: 80  ITSLGLDAEICGLARAVKKDIDVAIDCGVDS----IHTFIATSPLHREYKLKMSKEKIID 135
           I     ++ +C L+RA++KDID A      +    IHTFI+TS +H E KLK S E++++
Sbjct: 61  IARTIKNSRVCALSRALEKDIDAAAQALSVAEQFRIHTFISTSTIHVESKLKRSFEQVLE 120

Query: 136 IAVESIEYIKEHGVIVEFSAEDATRTELDYLKEVYKKAVEAGADRINVPDTVGVMVPNSM 195
           +AV +++Y +     VEFS EDA RT +D L  + + A+ AGA  IN+PDTVG  VP+  
Sbjct: 121 MAVGAVKYARRFTDDVEFSCEDAGRTPIDNLCRMVEAAIHAGARTINIPDTVGYTVPSEF 180

Query: 196 SYLIKELKNDI----KVPISVHCHNDFGIAVSNSVAAVEAGAEQVHCTVNGLGERAGNAS 251
             +I+ L N +    +  ISVHCH+D G++V+NS+ AV+ GA Q+ CT+NG+GERAGN S
Sbjct: 181 GSIIQTLFNRVPNIDQAIISVHCHDDLGLSVANSITAVQHGARQIECTMNGIGERAGNCS 240

Query: 252 LEETVM---TLNMVYGINTNVNTKMLTKLSKLVSHYTGIKTQPNKAIVGENSFAHESGIH 308
           LEE  M   T   + G  T +N K + + S LVS    +  Q NKAIVG N+F H SGIH
Sbjct: 241 LEEIAMILATRKNLLGFETGINAKEIHRTSNLVSQLCNMPIQSNKAIVGANAFTHSSGIH 300

Query: 309 AHGVLANALTYEPIDPEIVG-NRRRIVLGKHSGAHAIKSKLSEIGVEVGEIVSEEQFCEI 367
             G+L    TYE + PE +G NR  + +   SG H IK ++ E+G        +     +
Sbjct: 301 QDGMLKAQNTYEIMTPESIGLNRNNLNMTSRSGRHVIKHRMEEMGYS----SQDYNLDAL 356

Query: 368 VERVKAIGDKGKIVTDADVMAIAEDITKRTLKSERIVDLEQFAVIT-GNHVLPTASVALK 426
            E+   + DK   V D D+ A+A    +     +    L Q  V +     + TA+V ++
Sbjct: 357 YEQFLHLADKKGQVFDYDLEALA--FIEAQAAEDNFYQLRQLVVQSDSTEGVATATVRIE 414

Query: 427 VKDKIYKTSELGVGPVDAALKAIQAAVGENIRLNEYNISAISGGTDAIAEVTVRLENQEK 486
           V  +I   +  G GPVDAA  AI  A    I +  Y + A   G DA+ +V +     E+
Sbjct: 415 VGGEIKTEAATGNGPVDAAYNAIARATDRRIDIISYKLGAKGVGQDALGQVDITAVYHEQ 474

Query: 487 EVIAKATGDDVVKASVEAVIDGIN 510
                    DVV+AS  A++  +N
Sbjct: 475 NFHGVGLATDVVEASARALVHVMN 498