Pairwise Alignments

Query, 613 a.a., hypothetical protein from Methanococcus maripaludis S2

Subject, 806 a.a., Peptidase S16, ATP-dependent protease La (NCBI) from Rhodospirillum rubrum S1H

 Score = 49.3 bits (116), Expect = 6e-10
 Identities = 47/192 (24%), Positives = 85/192 (44%), Gaps = 22/192 (11%)

Query: 27  EFENCVSITAPAVSVTDEGYVGAAVDIDVKVSDGEGHAYMDTLPLTDIDMQGSARIASK- 85
           E E+ V +T   ++ T+ G  G  + I+  +  G+G   + T  L D+ M+ S + A   
Sbjct: 589 EREDLVGVTT-GLAWTEVG--GELLSIEAVMMPGKGQVTL-TGQLGDV-MKESVQAARSF 643

Query: 86  -----VAFDICGIDQESHDVYYIIRSDVPTVGGPSAGAVLTVATIAAINNWTLNKNVMMT 140
                V + I     E  D++  +        GPSAG  +  + ++A+    + K++ MT
Sbjct: 644 VRSRAVTYGIKPTQFEKGDIHVHVPEGATPKDGPSAGVAMCTSIVSAMTGIAVRKDIAMT 703

Query: 141 GMIGPDGTIGPVGGIIEKINVGAEQNVDYFLIPYGQQYQIDENNNSVDCIEYGQNL--GI 198
           G I   G + P+GG+ EK+       +   LIP          +N  D  E   N+  G+
Sbjct: 704 GEITLRGRVLPIGGLKEKLLAALRGGIKTVLIP---------KDNEKDLAEIPDNVKRGL 754

Query: 199 KVVEVSNIYDVV 210
            ++ V +  +V+
Sbjct: 755 TIIPVGHADEVL 766