Pairwise Alignments

Query, 476 a.a., cysteine--tRNA ligase from Methanococcus maripaludis S2

Subject, 460 a.a., Cysteinyl-tRNA synthetase (EC 6.1.1.16) from Pseudomonas fluorescens FW300-N2E2

 Score =  389 bits (999), Expect = e-112
 Identities = 201/475 (42%), Positives = 288/475 (60%), Gaps = 21/475 (4%)

Query: 1   MLKVYNTLTRCEEEFKTLNEKEVKMYVCGPTVYDNTHLGHGRTYVSFDIIRRYLEHMGYT 60
           +L +YNTLT+ +E FK L+  +V+MYVCG TVYD  H+GHGR+ V+FD++ R+L   GY 
Sbjct: 1   VLTIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHIGHGRSMVAFDLVTRWLRFSGYD 60

Query: 61  VNLVINFTDIDDKIIKRAYEKEKDPKEISEQFIKVFLDDMATLKVKPADIYPKVTEHISE 120
           +  V N TDI+DKII RA E  +    ++E+ IK   +D A L +   D+ P+ T+HI  
Sbjct: 61  LTYVRNITDIEDKIINRARENGEPYDALTERMIKAMHEDEARLNILKPDLEPRATDHIPG 120

Query: 121 IIAFIEKLIEKGFAYKTEDG-VYFEVKKFKNYGKLSNINLEDLVSGARIETSEKKKNQKD 179
           +++ I+ LI+KG+AY   +G VY+ V +F  YGKLS   +EDL  GARIE  E K++  D
Sbjct: 121 MLSMIQTLIDKGYAYAPGNGDVYYRVARFMGYGKLSRKKIEDLRIGARIEVDESKEDPLD 180

Query: 180 FALWKTAKPGEPKWESPFGSGRPGWHIECSAMSSKYLGEQFDIHGGGRDLSFPHHENEIA 239
           F LWK AKPGEP WESP+G+GRPGWHIECS MS+  LGE FDIHGGG DL FPHHENEIA
Sbjct: 181 FVLWKGAKPGEPSWESPWGAGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFPHHENEIA 240

Query: 240 QSSAYSGKDWVNYWLHTGFVMVNGEKMSKSLGNFVTIGDISKEYSPEILRFFFIQRHYRS 299
           QS A +GK + N W+H G + +NGEKMSKSL NF TI D+  +Y PE++R+  +  HYRS
Sbjct: 241 QSEAATGKTYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLDKYHPEVVRYLLVSSHYRS 300

Query: 300 PIDYTAESMNHVKNNLEKIYNVIENIRISLEKSEKSRTWDENEFLLYDILKNSKNNFYNA 359
            I+Y+ +++   K  LE+ Y+ ++ +        ++                    F   
Sbjct: 301 AINYSEDNLKDAKGALERFYHALKGLPSVPPAGGEAFV----------------ARFTEV 344

Query: 360 MNSDFNTVKALKSVFEVSNGVNKYLSLTKTPSEGLLLKALDFYKIIGEIFGLFENYFKES 419
           MN DF T +A   +FE+   +N+        + GL  +  +   ++G +    +++ +  
Sbjct: 345 MNDDFGTPEACAVLFEMVREINRLRESDLNAAAGLAARLKELASVLGVLQLEADDFLQAG 404

Query: 420 SDS--DEEEFVTFLIELRSDVRLQKNYEMSDKIRDGLKNLGYQIEDNPKEGTVFK 472
           ++   D  E  T LI+ R   R  K++  SD+IRD L  +G  +ED  K GT ++
Sbjct: 405 AEGRVDAAEVET-LIQARLTARANKDWAESDRIRDQLTAMGVVLEDG-KGGTTWR 457