Pairwise Alignments

Query, 476 a.a., cysteine--tRNA ligase from Methanococcus maripaludis S2

Subject, 478 a.a., cysteinyl-tRNA synthetase from Synechococcus elongatus PCC 7942

 Score =  345 bits (886), Expect = 1e-99
 Identities = 196/474 (41%), Positives = 282/474 (59%), Gaps = 21/474 (4%)

Query: 2   LKVYNTLTRCEEEFKTLNEKEVKMYVCGPTVYDNTHLGHGRTYVSFDIIRRYLEHMGYTV 61
           L +YNTLTR ++ F+ L    V +Y CG TVYD  HLGH R+Y+ +D +RRYL  +GY V
Sbjct: 3   LSLYNTLTRQKQRFEPLQAGSVSLYCCGVTVYDYCHLGHARSYIVWDTLRRYLLWLGYRV 62

Query: 62  NLVINFTDIDDKIIKRAYEKEKDPKEISEQFIKVFLDDMATLKVKPADIYPKVTEHISEI 121
             V NFTDIDDKI++R+ ++    + I++++ + + +DMA L +  AD YP+ T  +  I
Sbjct: 63  RYVQNFTDIDDKILRRSRQEGTTMQAIADRYTQAYFEDMARLNILEADDYPRATHTLDGI 122

Query: 122 IAFIEKLIEKGFAYKTEDGVYFEVKKFKNYGKLSNINLEDLVSGA--RIETSEK--KKNQ 177
              I +L +KGFAY  +  VYF V++F++YGKLS   LEDL +GA  R+E++E+  K + 
Sbjct: 123 QRLIAELEDKGFAYAADGDVYFSVRRFQDYGKLSGRKLEDLKAGASGRVESAEESLKHDP 182

Query: 178 KDFALWKTAKPGEPKWESPFGSGRPGWHIECSAMSSKYLGEQFDIHGGGRDLSFPHHENE 237
            DFALWK AKP EP W+SP+G GRPGWHIECSAM    LG+  DIH GG DL FPHHENE
Sbjct: 183 FDFALWKAAKPEEPAWDSPWGPGRPGWHIECSAMVRDRLGDSIDIHVGGADLVFPHHENE 242

Query: 238 IAQSSAYSGKDWVNYWLHTGFVMVNGEKMSKSLGNFVTIGDISKE--YSPEILRFFFIQR 295
           IAQS A +G     YWLH G V V GEKMSKSLGNF TI  +  E   SP +LR F +Q 
Sbjct: 243 IAQSEAVTGHPLARYWLHNGMVNVGGEKMSKSLGNFTTIRQLLDEGGISPMVLRLFVLQA 302

Query: 296 HYRSPIDYTAESMNHVKNNLEKIYNVIENIRISLEKSEKSRTWDENEFLLYDILKNSKNN 355
           +YR PID+T E++   +N  E +    E +       ++   W E+  +  D+     + 
Sbjct: 303 NYRKPIDFTDEALQACQNGWETLQ---EGLHFGEHWGDR-LGWTESVTVDPDL----SDR 354

Query: 356 FYNAMNSDFNTVKALKSVFEVSNGVNKY--LSLTKTPSEGLLLKALDFYKIIGEIFGLF- 412
           F  AM+ D NT  AL  +FE++  + +   L + +   +G   +    +  + ++ G+  
Sbjct: 355 FRMAMDDDLNTPAALAVLFELAKELRRQQNLLIHEGHLDGDAQQLHQHWVTLVQLAGVLG 414

Query: 413 ---ENYFKESSDSDEEEFVTFLIELRSDVRLQKNYEMSDKIRDGLKNLGYQIED 463
              E    E+++ DE     ++ + R   R  K++  +D+IR  L +LG  + D
Sbjct: 415 LEAEPELAETNELDEAAIEDWIAK-RHAARQAKDFAEADRIRHYLADLGITLID 467