Pairwise Alignments

Query, 476 a.a., cysteine--tRNA ligase from Methanococcus maripaludis S2

Subject, 459 a.a., cysteinyl-tRNA synthetase (RefSeq) from Shewanella amazonensis SB2B

 Score =  394 bits (1012), Expect = e-114
 Identities = 200/474 (42%), Positives = 293/474 (61%), Gaps = 17/474 (3%)

Query: 1   MLKVYNTLTRCEEEFKTLNEKEVKMYVCGPTVYDNTHLGHGRTYVSFDIIRRYLEHMGYT 60
           MLK+YN+++R +EEFK +   ++ MYVCG T+YD  H+GHGRT+V FD+I RYL + GY 
Sbjct: 1   MLKIYNSISRQKEEFKPIQPGKIGMYVCGVTIYDLCHIGHGRTFVCFDMIVRYLRYRGYE 60

Query: 61  VNLVINFTDIDDKIIKRAYEKEKDPKEISEQFIKVFLDDMATLKVKPADIYPKVTEHISE 120
           VN   N TD+DDKIIKRA E  +    ++E+ I     D   L +      P+ T HI E
Sbjct: 61  VNYQRNITDVDDKIIKRANENGESCDSLTERLIGEMHADFDALNMVRPSFEPRATLHIDE 120

Query: 121 IIAFIEKLIEKGFAYKTEDG-VYFEVKKFKNYGKLSNINLEDLVSGARIETSEKKKNQKD 179
           II  + +L+++G AY   DG V F+V  +  YG+LS  +LE L +GAR+E  E K+N  D
Sbjct: 121 IIDMVTRLLDRGHAYVAADGDVLFDVSSYAAYGRLSGQDLEQLQAGARVEVDENKRNPMD 180

Query: 180 FALWKTAKPGEPKWESPFGSGRPGWHIECSAMSSKYLGEQFDIHGGGRDLSFPHHENEIA 239
           F LWK +KPGEP W+SP+G GRPGWHIECSAM+SK+LG  FDIHGGG DL FPHHENEIA
Sbjct: 181 FVLWKMSKPGEPTWDSPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQFPHHENEIA 240

Query: 240 QSSAYSGKDWVNYWLHTGFVMVNGEKMSKSLGNFVTIGDISKEYSPEILRFFFIQRHYRS 299
           QS       +VN W+HTG VMV+ EKMSKSLGNF TI D+   Y  + +R+F +  HYRS
Sbjct: 241 QSCCAHDTPYVNTWMHTGMVMVDREKMSKSLGNFFTIRDVLAHYDAQTVRYFLLSGHYRS 300

Query: 300 PIDYTAESMNHVKNNLEKIYNVIENIRISLEKSEKSRTWDENEFLLYDILKNSKNNFYNA 359
            ++Y+ +++   + +LE++Y  ++ + +++E +        +EF+         + F  A
Sbjct: 301 QLNYSEDNLKQARASLERMYTALKGLDLTVEAA------GADEFV---------SRFMAA 345

Query: 360 MNSDFNTVKALKSVFEVSNGVNKYLSLTKTPSEGLLLKALDFYKIIGEIFGLFENYFKES 419
           M+ DFNT +A   +F++   +N+  +     +  L +   +  +++G +    E + +  
Sbjct: 346 MDDDFNTPEAYSVLFDMVREINRLKTSDMAAASQLGVALKELAEVLGILSSTPEAFLQGE 405

Query: 420 SDSDEEEFVTFLIELRSDVRLQKNYEMSDKIRDGLKNLGYQIEDNPKEGTVFKK 473
            ++DE   +  LI  R+  R +K++  +D  RD L  LG  +ED P EGT ++K
Sbjct: 406 GNADEVAEIEALIVERNRARAEKDWPAADVARDRLNALGVVLEDGP-EGTTWRK 458