Pairwise Alignments

Query, 476 a.a., cysteine--tRNA ligase from Methanococcus maripaludis S2

Subject, 465 a.a., cysteinyl-tRNA synthetase CysS from Phaeobacter inhibens DSM 17395

 Score =  295 bits (756), Expect = 2e-84
 Identities = 161/389 (41%), Positives = 230/389 (59%), Gaps = 35/389 (8%)

Query: 2   LKVYNTLTRCEEEFKTLNEKEVKMYVCGPTVYDNTHLGHGRTYVSFDIIRRYLEHMGYT- 60
           +K++NT TR +E    +N  +V++Y+CGPTVYD  HLG+ R  V FD++ R L H+  T 
Sbjct: 4   IKLHNTRTRGKEVLNPINPDDVRLYLCGPTVYDRAHLGNARPVVVFDVLYRLLRHVYGTD 63

Query: 61  -VNLVINFTDIDDKIIKRAYEK---------EKDPKEISEQFIKVFLDDMATLKVKPADI 110
            V    NFTD+DDKI   A  +         E+  +E +E+ I  +L DMA L     D 
Sbjct: 64  HVTYARNFTDVDDKINATALARKEAGAPGTLEELVQERTEETISWYLADMAELGALEPDH 123

Query: 111 YPKVTEHISEIIAFIEKLIEKGFAYKTEDG-VYFEVKKFKNYGKLSNINLEDLVSGARIE 169
            P+ T +I ++IA IE+LI KG AY    G V F VK +K+YG LS  +++D+++GAR+E
Sbjct: 124 MPRATAYIPQMIAMIEELIAKGHAYADGAGHVLFSVKSYKDYGALSGRSVDDMIAGARVE 183

Query: 170 TSEKKKNQKDFALWKTAKPGEPKWESPFGSGRPGWHIECSAMSSKYLGEQFDIHGGGRDL 229
            ++ K++  DF LWK +    P W+SP+G GRPGWHIECSAMS +  G+ FDIHGGG DL
Sbjct: 184 VADNKRDPMDFVLWKPSTDELPGWDSPWGRGRPGWHIECSAMSHELFGDSFDIHGGGNDL 243

Query: 230 SFPHHENEIAQS-SAYSGKDWVNYWLHTGFVMVNGEKMSKSLGNFVTIGD-ISKEYSPEI 287
            FPHHENEIAQS  A+   D+   WLH   + V G+KMSKSLGNF T+ D + + Y  E+
Sbjct: 244 MFPHHENEIAQSCCAHPEGDFAKIWLHNEMLQVEGKKMSKSLGNFFTVRDLLDQGYPGEV 303

Query: 288 LRFFFIQRHYRSPIDYTAESMNHVKNNLEKIYNVIENIRISLEKSEKSRTWDENEFLLYD 347
           +R  F+Q HYR P+D+T +     +  L K Y +             + T  +NE     
Sbjct: 304 IRLVFLQTHYRKPMDWTDKKAKEAEATLRKWYQL-------------AATALDNEEPYVG 350

Query: 348 ILKNSKNNFYNAMNSDFNTVKALKSVFEV 376
           ++        NA++ D NT +A+  + ++
Sbjct: 351 VI--------NALSDDLNTAQAIAELHQL 371