Pairwise Alignments

Query, 476 a.a., cysteine--tRNA ligase from Methanococcus maripaludis S2

Subject, 485 a.a., cysteinyl-tRNA synthetase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  404 bits (1038), Expect = e-117
 Identities = 227/486 (46%), Positives = 300/486 (61%), Gaps = 31/486 (6%)

Query: 2   LKVYNTLTRCEEEFKTLNEKEVKMYVCGPTVYDNTHLGHGRTYVSFDIIRRYLEHMGYTV 61
           +++YN+L+R +E F      +V MYVCG T YD  H+GH R+ V FD++ RYL H G  V
Sbjct: 1   MQIYNSLSRRKELFTPAVPGKVNMYVCGITAYDLCHIGHARSAVVFDVLVRYLRHTGLDV 60

Query: 62  NLVINFTDIDDKIIKRAYEKEKDPKEISEQFIKVFLDDMATLKVKPADIYPKVTEHISEI 121
               NFTD+DDKIIKRA E+    ++++E++I  F +DM  L V  ADI PK T HI E+
Sbjct: 61  TFARNFTDVDDKIIKRANEEGLTSQQVAEKYIDTFYEDMDRLNVLRADIEPKATGHILEM 120

Query: 122 IAFIEKLIEKGFAYKTEDG-VYFEVKKFKNYGKLSNINLEDLVSGARIETSEKKKNQKDF 180
           IA  EKLI KG AY T  G VYF V+ F  YGKLS  +++D+ SGAR+   E+K++  DF
Sbjct: 121 IALCEKLIAKGKAYATPSGDVYFRVRSFPEYGKLSGRDIDDMRSGARVAPGEEKEDPLDF 180

Query: 181 ALWKTAKPGEPKWESPFGSGRPGWHIECSAMSSKYLGEQFDIHGGGRDLSFPHHENEIAQ 240
           ALWK AKPGEP W SP+G GRPGWHIECSAMS K++    DIHGGG+DL FPHHENEIAQ
Sbjct: 181 ALWKAAKPGEPSWTSPWGEGRPGWHIECSAMSEKHMPLPLDIHGGGQDLIFPHHENEIAQ 240

Query: 241 SSAYSGKDWVNYWLHTGFVMVNGEKMSKSLGNFVTIGDISKEYSPEILRFFFIQRHYRSP 300
           + A   K +V YW+H GFV V+ EKMSKSLGNF TI DI + Y PE+LRFF + +HYRSP
Sbjct: 241 TEAALDKPFVRYWMHNGFVQVDAEKMSKSLGNFKTIRDILEGYLPEVLRFFLLTKHYRSP 300

Query: 301 IDYTAESMNHVKNNLEKIYNVIENIRISLEKSEKSRT-WDENEF-----LLYDILKNSKN 354
           ID+T +SM+  + +L++IY       +SL ++E+SR+ W            +D L  +  
Sbjct: 301 IDFTFDSMDEAEKSLKRIYEA-----LSLARTERSRSKWSATPLPADVTAEFDTLDRA-- 353

Query: 355 NFYNAMNSDFNTVKALKSVFEVSNGVNKYL---SLTKTPSEGLLLKALD-----FYKIIG 406
            F  A+  D NT  AL  VF     VN+ L   +L K+     LL+ LD     + K++G
Sbjct: 354 -FDEALEDDLNTAAALGHVFGTIRLVNRLLEDKNLRKSAETLALLERLDGLVAKWMKVLG 412

Query: 407 EIFG----LFENYFKE---SSDSDEEEFVTFLIELRSDVRLQKNYEMSDKIRDGLKNLGY 459
            +FG     F +  KE        +   V  L+E R  VR  K++  +D IRD L  LG 
Sbjct: 413 -VFGREPEAFLSDLKECRIRRKGIDTTKVDALLEERKSVRAAKDFARADAIRDELAALGI 471

Query: 460 QIEDNP 465
           ++ D P
Sbjct: 472 EVRDTP 477