Pairwise Alignments

Query, 293 a.a., CoB--CoM heterodisulfide reductase subunit B from Methanococcus maripaludis S2

Subject, 249 a.a., Protein of unknown function DUF224, cysteine-rich region (NCBI) from Rhodospirillum rubrum S1H

 Score = 48.9 bits (115), Expect = 1e-10
 Identities = 51/228 (22%), Positives = 87/228 (38%), Gaps = 29/228 (12%)

Query: 5   FFLGCIMPNRYAGVESATRTVMEKLGVELVDMPGASCCPAPGVFGSFDQKTWLTLA---A 61
           FF  C++   Y     A  T++E+ G+ ++  PG +CC  P          WL  A   A
Sbjct: 14  FFATCLVDLFYPEAGLAGMTLLERQGIRVIFPPGQTCCGQP-----MRNNGWLDEARAIA 68

Query: 62  RNLVIAEEMGTDIVTVCNGCYGSLYEAAHMLHENKEALAMVNEQLKEIGKEYKGTVHVRH 121
           R  +        IV     C G ++     L   +   A   E      + Y+ T  + H
Sbjct: 69  RQQIKTFPKPIPIVVPSGSCAGMMHRHYPELFAGQPDEA---EARAFAARVYELTWFLVH 125

Query: 122 FAELIYKEIGVDKIRENVVKPLAVNIGVHYGCHFLKPTAAKGLGNAEHPTMLDELVEATG 181
             +L   + G             V +  H  CH  +    +G    E  ++L  L   T 
Sbjct: 126 VCKLSLTDGGP-----------PVTVAFHASCHSQREMGVRG----EPESLLAGLSNVTL 170

Query: 182 AKSVDYKDKMMCCGAGGGVRAKELDLALSMTQEKIENMLAVGADATVN 229
           AK    +    CCG GG    ++ +++ +M  +KI+++   GA   ++
Sbjct: 171 AK---LERPNECCGFGGAFSVRQPEISAAMVADKIDDLSKSGASEVLS 215