Pairwise Alignments

Query, 293 a.a., CoB--CoM heterodisulfide reductase subunit B from Methanococcus maripaludis S2

Subject, 494 a.a., succinate dehydrogenase/fumarate reductase iron-sulfur subunit from Methanococcus maripaludis JJ

 Score = 78.6 bits (192), Expect = 3e-19
 Identities = 69/266 (25%), Positives = 118/266 (44%), Gaps = 40/266 (15%)

Query: 1   MKYAFFLGCIMPNRYAGVESATRTVMEKLGVELVDMPGASCCPAPGV-FGSFDQKTWLTL 59
           M+ AFF GC++  R   +  +   V+   GV ++      CC +P +  G  D     +L
Sbjct: 263 MRVAFFTGCLVDFRLQEIGKSAIRVLNAHGVSVIIPKNQVCCGSPFIRTGQTDISE--SL 320

Query: 60  AARNLVIAEEMGTD-IVTVCNGCYGSLYEAAHMLHENKEALAMVNEQLKEIGKEYKGTVH 118
             +NL I  ++  D +VT+C GC  +L       ++ KE             KE+K    
Sbjct: 321 KKQNLEIFNDLNVDSVVTLCAGCGSTLK------NDYKE-------------KEFK---- 357

Query: 119 VRHFAELIYKEIGVDKIRENVVKPLAVNIGVHYGCHFLKPTAAKGLGNAEHPTMLDELVE 178
           V    E++ K   +D       KPL + +  H  CH       +G      P  + E + 
Sbjct: 358 VMDITEVLVKVGLID------YKPLDITVTYHDPCHL-----RRGQKVYLEPRKILESIP 406

Query: 179 ATGAKSVDYKDKMMCCGAGGGVRAKELDLALSMTQEKIENMLAVGADATVNVCPFCQLQF 238
                 ++  D+  CCGAGGGVR+ + ++A ++ + K   + A  AD  + VCPFC+   
Sbjct: 407 KLKFLEMEIPDQ--CCGAGGGVRSGKPEVADAIGKRKANMIYATDADYLITVCPFCEYHI 464

Query: 239 DRGQVEIKEKLGNEYNFPVVHLSQLL 264
                +  ++ G + + PV+++  LL
Sbjct: 465 RDSLTKYLKEHGLKKDIPVMNIISLL 490