Pairwise Alignments

Query, 293 a.a., CoB--CoM heterodisulfide reductase subunit B from Methanococcus maripaludis S2

Subject, 422 a.a., iron-sulfur cluster-binding protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 59.7 bits (143), Expect = 1e-13
 Identities = 61/239 (25%), Positives = 95/239 (39%), Gaps = 21/239 (8%)

Query: 1   MKYAFFLGCIMPNRYAGVESATRTVMEKLGVELVDMPGASCCPAPGVFGSFDQKTWLTLA 60
           +K AFF GC+    +  V  A   V    GV +    G +CC  P +  S D+ ++  L 
Sbjct: 177 VKVAFFPGCLGDKMFTSVADACLKVFSHHGVGVYMPEGMACCGIPSL-ASGDRVSYDKLV 235

Query: 61  ARNLVIAEEMGTD-IVTVCNGCYGSLYEAAHMLHENKEALAMVNEQLKEIGKEYKGTVHV 119
             NL +  +   D +VT C  C  ++ E    +  +        E  K+I +  K T+ V
Sbjct: 236 KLNLDLFAKGKFDYLVTPCATCTATIKEIWPKMMGDYPF-----EMRKQIEELEKKTMDV 290

Query: 120 RHFA-ELIYKEIGVDKIRENVVKPLAVNIGVHYGCHFLKPTAAKGLGNAEHPTMLDELVE 178
             F  +++      D  + NV       +  H  CH       K LG    P  L  +  
Sbjct: 291 NAFVVDVLGVTPAADAPKGNV------KVTFHDSCHM-----KKSLGVTAQPRNLIRMNP 339

Query: 179 ATGAKSVDYKDKMMCCGAGGGVRAKELDLALSMTQEKIENMLAVGADATVNVCPFCQLQ 237
                 +   D+  CCG+GG       DL+  + + K +N++  GA      CP C LQ
Sbjct: 340 KYDLVEMAECDR--CCGSGGSFNLYHYDLSKQIGERKRQNIVDSGAQVVSTGCPACMLQ 396