Pairwise Alignments

Query, 264 a.a., winged helix-turn-helix transcriptional regulator from Methanococcus maripaludis S2

Subject, 264 a.a., winged helix-turn-helix transcriptional regulator from Methanococcus maripaludis JJ

 Score =  514 bits (1324), Expect = e-151
 Identities = 260/264 (98%), Positives = 261/264 (98%)

Query: 1   MKKRNITEFQILSEVVRKQPHIKQKEIADILGITVQGVSEHMRNLIKDEQIKNKGRGEYI 60
           MKKRNITEFQILSEVVRKQPHIKQKEIADILGITVQGVSEHMRNLIKDEQIKNKGRGEYI
Sbjct: 1   MKKRNITEFQILSEVVRKQPHIKQKEIADILGITVQGVSEHMRNLIKDEQIKNKGRGEYI 60

Query: 61  ITEKGMASLKTWISNFKNYLNDVNQNLYRYKDVWPAIATEEIVPGETVGVYMKKGIIYVS 120
           ITEKGMASLK WISNFKNYLNDVNQNLYRYKDVWPAIATE+IVPGE VGVYMKKGIIYVS
Sbjct: 61  ITEKGMASLKNWISNFKNYLNDVNQNLYRYKDVWPAIATEDIVPGENVGVYMKKGIIYVS 120

Query: 121 KNIESDATAKVFYGGASGEDVAIHEIHGHIEVQNGKVIVLKIPSEVMGGSRNVDYDIVQK 180
           KNIESDATAKVFYGG SGEDVAIHEIHGHIEVQNGKVIVLKIPSEVMGGSRNVDYDIVQK
Sbjct: 121 KNIESDATAKVFYGGESGEDVAIHEIHGHIEVQNGKVIVLKIPSEVMGGSRNVDYDIVQK 180

Query: 181 TLEEYPDAVIATAGTVGTVIANKLEIHPDIRFAVSEGIVSACNRGCDVIAMITGKMAEKI 240
           TLEEYPDAVIATAGTVGTVIANKLEIHPDIRFAVSEGIVSACNRGCDVIAMITGKMAEKI
Sbjct: 181 TLEEYPDAVIATAGTVGTVIANKLEIHPDIRFAVSEGIVSACNRGCDVIAMITGKMAEKI 240

Query: 241 IKTVDKNKISYTLLNASKTTDSIE 264
           IKTVDKNKISYTLLNASKTTDSIE
Sbjct: 241 IKTVDKNKISYTLLNASKTTDSIE 264