Pairwise Alignments

Query, 462 a.a., V-type ATP synthase subunit B from Methanococcus maripaludis S2

Subject, 444 a.a., ATPase FliI/YscN family from Pseudomonas stutzeri RCH2

 Score =  148 bits (374), Expect = 3e-40
 Identities = 107/361 (29%), Positives = 176/361 (48%), Gaps = 14/361 (3%)

Query: 1   MDAMQKTIEYTSVSRIAGPLMVIDG--IEGIAY----GEIVDITTPNGDKRTGQVLEARE 54
           +D   ++++   +++++G L+ + G  +E +      G+   +   +G     QV+    
Sbjct: 9   LDEALRSLDNVQLAKVSGRLVRVSGMLLESLGCQRMTGQRCYVEQGDGSMLEAQVVGFNR 68

Query: 55  EIAVVQVFEGTSELNTSETKVRFTGDTAKIGVSYDMLGRIFNGAGKPLDGGPEIIAEEKL 114
           +I  +  F+    L T+ ++V    D AK+ +    LGR+ NG G+PLD   ++   + L
Sbjct: 69  DITYLMPFKKPVGL-TAGSRVFPAPDDAKLHIDESWLGRVVNGLGEPLDELGKLGGRDPL 127

Query: 115 DINGYPLNPVSRNPPNAFVQTGVSTIDGTNTLVRGQKIPIFSGSGLPHNKLATQIARQAK 174
                 +NP+ R P +  +  GV  I+ T TL +GQ++ +F+GSG+  + L   I RQ K
Sbjct: 128 PTELPSVNPLKRKPVSEALDVGVRAINATLTLGKGQRVGLFAGSGVGKSVLLGMITRQTK 187

Query: 175 VRGEGEQFAVVFAAMGITGEESNYFMDEFKKTGALEKAVVFINLADDPAIERILTPRIAL 234
                    VV   +G  G E   F+        L+KAVV +  A++  + R+    +  
Sbjct: 188 AD------VVVVGLIGERGREVQEFLLHSLGEEGLKKAVVVVAPANESPLMRLKATELCH 241

Query: 235 TTAEYLAYEKGMHVLVILTDLTNYCEALREIAAARNEVPGRRGYPGYMYTDLACLYERAG 294
           + A Y   ++G  VL+++  LT Y  A REIA A  E P  +GYP  ++  L  L E AG
Sbjct: 242 SIAAYFR-DQGHDVLLLVDSLTRYAMAQREIALALGEPPATKGYPPSVFGMLPELVESAG 300

Query: 295 RVKGKEGTVTQIPILTMPDDDITHPIPDLTGYITEGQIVLSRELNRKGVYPPVDILPSLS 354
                 G+++ I  +    DD   PI D    I +G IVLSR L   G YP +D+  S+S
Sbjct: 301 NGASDNGSLSAIYTVLAEGDDQQDPIVDCARAILDGHIVLSRRLAEAGHYPAIDVCASVS 360

Query: 355 R 355
           R
Sbjct: 361 R 361