Pairwise Alignments

Query, 462 a.a., V-type ATP synthase subunit B from Methanococcus maripaludis S2

Subject, 505 a.a., F0F1 ATP synthase subunit alpha from Synechococcus elongatus PCC 7942

 Score =  129 bits (324), Expect = 2e-34
 Identities = 104/353 (29%), Positives = 165/353 (46%), Gaps = 14/353 (3%)

Query: 12  SVSRIAGPLMVIDGIEGIAYGEIVDITTPNGDKRTGQVLEAREE-IAVVQVFEGTSELNT 70
           +V ++   +  I G++ +  GE+V+      D  TG  L   E+ +  V + EG +    
Sbjct: 31  TVLQVGDGIARIYGLQQVMSGELVEFE----DGTTGIALNLEEDNVGAVLMGEGRNIQEG 86

Query: 71  SETKVRFTGDTAKIGVSYDMLGRIFNGAGKPLDGGPEIIAEEKLDINGYPLNPVSRNPPN 130
           S  K   TG  A+I V   ++GR+ +  G PLDG  EI A E   I       ++R   +
Sbjct: 87  STVKA--TGKIAQIPVGDALVGRVVSPLGAPLDGKGEIAATENRLIESPAPGIIARRSVH 144

Query: 131 AFVQTGVSTIDGTNTLVRGQKIPIFSGSGLPHNKLATQIARQAKVRGEGEQFAVVFAAMG 190
             +QTG++ ID    + RGQ+  I            T IA    +  +GE    V+ A+G
Sbjct: 145 EPMQTGITAIDAMIPIGRGQRELIIG----DRQTGKTAIAIDTILNQKGEDVICVYVAIG 200

Query: 191 ITGEESNYFMDEFKKTGALEKAVVFINLADDPAIERILTPRIALTTAEYLAYEKGMHVLV 250
                    ++  ++ GAL+  VV    A +PA  + L P      AEY    KG   LV
Sbjct: 201 QKASSVANIIEVLRERGALDYTVVVAANASEPATLQYLAPYAGAAIAEYFMC-KGKATLV 259

Query: 251 ILTDLTNYCEALREIAAARNEVPGRRGYPGYMYTDLACLYERAGRVKGK--EGTVTQIPI 308
           I  DLT   +A R+++      PGR  YPG ++   + L ERA ++      G++T +P+
Sbjct: 260 IYDDLTKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSDALGGGSMTALPV 319

Query: 309 LTMPDDDITHPIPDLTGYITEGQIVLSRELNRKGVYPPVDILPSLSRLAGNGQ 361
           +     D++  IP     IT+GQI LS +L   G+ P +++  S+SR+    Q
Sbjct: 320 IETQAGDVSAYIPTNVISITDGQIFLSSDLFNSGLRPAINVGISVSRVGSAAQ 372