Pairwise Alignments

Query, 462 a.a., V-type ATP synthase subunit B from Methanococcus maripaludis S2

Subject, 442 a.a., flagellum-specific ATP synthase FliI from Phaeobacter inhibens DSM 17395

 Score =  144 bits (364), Expect = 4e-39
 Identities = 100/344 (29%), Positives = 167/344 (48%), Gaps = 10/344 (2%)

Query: 13  VSRIAGPLMVIDGIEGIA-YGEIVDITTPNGDKRTGQVLEAREEIAVVQVFEGTSELNTS 71
           VS I+G  + + G+ G A  G+ + +     D   G+V+  R   + V +   T+    +
Sbjct: 24  VSEISGGAITVSGLNGQARIGDRLILRRAGSDPLEGEVM--RISGSEVSMLPDTAPDRVA 81

Query: 72  ETKVRFTGDTAKIGVSYDMLGRIFNGAGKPLDGGPEIIAEEKLDINGYPLNPVSRNPPNA 131
                    T     +   +GR+ +  G PLDG P +  E   D+   P    SR P   
Sbjct: 82  VGDAVLLHPTPDFAPADSWIGRVIDPFGAPLDGRPMMRGEATRDLMAAPPKAASRRPMGE 141

Query: 132 FVQTGVSTIDGTNTLVRGQKIPIFSGSGLPHNKLATQIARQAKVRGEGEQFAVVFAAMGI 191
            + TG++  +    +V+GQ++ +F+GSG+  + L   +A+        E   VV A +G 
Sbjct: 142 RLATGLAVFNTILPIVKGQRVGLFAGSGVGKSTLLATLAQNM------EADVVVIALIGE 195

Query: 192 TGEESNYFMDEFKKTGALEKAVVFINLADDPAIERILTPRIALTTAEYLAYEKGMHVLVI 251
            G E N+F+ +      +++AVV    +D  A+ R      A+  AE+   ++G +VL +
Sbjct: 196 RGREVNHFVKDVLGDEGMQRAVVVAATSDQSALVRRRCAWSAMAVAEHFR-DQGKNVLFL 254

Query: 252 LTDLTNYCEALREIAAARNEVPGRRGYPGYMYTDLACLYERAGRVKGKEGTVTQIPILTM 311
              +T + EA REIA +  E P  RGYP  +   +  L ERAG   G +G +T I  + +
Sbjct: 255 ADSVTRFAEAHREIAVSSGEAPALRGYPPSVTPLITGLCERAGPGSGDQGDITAIFSVLV 314

Query: 312 PDDDITHPIPDLTGYITEGQIVLSRELNRKGVYPPVDILPSLSR 355
              D+  PI D+   + +G IVL+RE+  +G +P VD+  S+SR
Sbjct: 315 AGSDMDEPIADILRGVLDGHIVLNREIAERGRFPAVDVSRSVSR 358