Pairwise Alignments

Query, 462 a.a., V-type ATP synthase subunit B from Methanococcus maripaludis S2

Subject, 446 a.a., flagellum-specific ATP synthase (RefSeq) from Shewanella loihica PV-4

 Score =  144 bits (363), Expect = 6e-39
 Identities = 102/356 (28%), Positives = 170/356 (47%), Gaps = 11/356 (3%)

Query: 32  GEIVDITTPNGDKRTGQVLEAREEIAVVQVFEGTSELNTSETKVRFTGDTAKIGVSYDML 91
           G +  I T  GD    +V+   +++  +   E  S +     KV   G+   + V   +L
Sbjct: 48  GSLCSIATMAGDL-IAEVIGFDDKLLYLMPIEELSGVMPG-AKVTPLGEQTGLNVGMGLL 105

Query: 92  GRIFNGAGKPLDGGPEIIAEEKLDINGYPLNPVSRNPPNAFVQTGVSTIDGTNTLVRGQK 151
           GR+ +G G P+DG  ++  ++K   +   LNP++R   +  +  GV  I+   T+ +GQ+
Sbjct: 106 GRVLDGNGAPIDGLGQLHTDQKATRHATMLNPLARRAISEPLDVGVRAINAMLTVGKGQR 165

Query: 152 IPIFSGSGLPHNKLATQIARQAKVRGEGEQFAVVFAAMGITGEESNYFMDEFKKTGALEK 211
           + +F+GSG+  + L   + R            +V   +G  G E   F++E        +
Sbjct: 166 MGLFAGSGVGKSVLLGMMTRGTTAD------VIVVGLVGERGREVKEFIEEILGAEGRSR 219

Query: 212 AVVFINLADDPAIERILTPRIALTTAEYLAYEKGMHVLVILTDLTNYCEALREIAAARNE 271
           +VV    AD   + R+     +   AEY   + G +VL+++  LT Y +A REIA A  E
Sbjct: 220 SVVVAAPADTSPLMRLRACETSTRIAEYFR-DLGYNVLLLMDSLTRYAQAQREIALAVGE 278

Query: 272 VPGRRGYPGYMYTDLACLYERAGRVKGKEGTVTQIPILTMPDDDITHPIPDLTGYITEGQ 331
            P  +GYP  ++  L  L ERAG     +G++T    +    DD+  PI D    I +G 
Sbjct: 279 PPATKGYPPSVFAKLPKLVERAGNGGAGQGSITAFYTVLTEGDDLQDPIADAARAILDGH 338

Query: 332 IVLSRELNRKGVYPPVDILPSLSRLAGNGQGEGKTRDDHSKVISQAYAAYAEGRGL 387
           IVLSR L   G YP +D+  S+SR+A     +     + ++ + Q Y+ Y + R L
Sbjct: 339 IVLSRALADSGHYPAIDVEASISRVAPMVISDAHL--EATRRVKQMYSLYQQNRDL 392