Pairwise Alignments

Query, 462 a.a., V-type ATP synthase subunit B from Methanococcus maripaludis S2

Subject, 437 a.a., flagellum-specific ATP synthase FliI (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  137 bits (344), Expect = 9e-37
 Identities = 88/271 (32%), Positives = 139/271 (51%), Gaps = 9/271 (3%)

Query: 86  VSYDMLGRIFNGAGKPLDGGPEIIAEEKLDINGYPLNPVSRNPPNAFVQTGVSTIDGTNT 145
           V   +LGR F+  G PLDGG  ++ E    +   P NP++R   +  +  GV  I+   T
Sbjct: 96  VGEGLLGRAFDAFGAPLDGGTPVMPEAWAPLYASPPNPLTRPRIDTPLDVGVRCINSLLT 155

Query: 146 LVRGQKIPIFSGSGLPHNKLATQIARQAKVRGEGEQFAVVFAAMGITGEESNYFMDEFKK 205
           L RGQ++ I +GSG+  + L   +AR  + +        V   +G  G E   FM++   
Sbjct: 156 LGRGQRVGIMAGSGVGKSTLMGMMARYTEAQ------VNVIGLIGERGREVVEFMEKDLG 209

Query: 206 TGALEKAVVFINLADDPAIERILTPRIALTTAEYLAYEKGMHVLVILTDLTNYCEALREI 265
              + ++V+ +  +D   + R+     A   AE+   ++G  VL+++  +T +  A RE+
Sbjct: 210 PEGMARSVLVVATSDQSPLVRMRAAYAATAVAEFFR-DQGKDVLLMMDSVTRFAMAAREV 268

Query: 266 AAARNEVPGRRGYPGYMYTDLACLYERAGRVKGKEGTVTQIPILTMPDDDITHPIPDLTG 325
             A  E P  +GY   ++  L  L ERAGR    EGT+T I  + +  DD   PI D   
Sbjct: 269 GLAVGEPPTTKGYTPTVFAQLPRLLERAGR--SPEGTITGIYTVLVDGDDFNEPIADAVR 326

Query: 326 YITEGQIVLSRELNRKGVYPPVDILPSLSRL 356
            I +G IVL+REL  +G +P +D+L S+SRL
Sbjct: 327 SILDGHIVLTRELADQGHFPAIDVLKSISRL 357