Pairwise Alignments

Query, 462 a.a., V-type ATP synthase subunit B from Methanococcus maripaludis S2

Subject, 470 a.a., ATP synthase, F1 beta subunit (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  134 bits (337), Expect = 6e-36
 Identities = 102/375 (27%), Positives = 168/375 (44%), Gaps = 16/375 (4%)

Query: 35  VDITTPNGDKRTGQVLEAREEIAVVQVFEGTSELNTSETKVRF-----TGDTAKIGVSYD 89
           +DI  PN       V E  + +    V   T  ++ +E  VR      TG    + V   
Sbjct: 32  LDIKNPNNTDAPDLVCEVAQHLGDNIV--RTIAMDATEGLVRGMEASDTGKPIMVPVGKA 89

Query: 90  MLGRIFNGAGKPLDGGPEIIAEEKLDINGYPLNPVSRNPPNAFVQTGVSTIDGTNTLVRG 149
            LGRI N  G+P+D    I A++ L I+        +N     ++TG+  +D      +G
Sbjct: 90  SLGRIMNVVGRPVDELGPINADKSLPIHRAAPEFTEQNTKVELLETGIKVVDLLIPFPKG 149

Query: 150 QKIPIFSGSGLPHNKLATQIARQAKVRGEGEQFAVVFAAMGITGEESNYFMDEFKKTGAL 209
            K+ +F G+G+    +  ++      +  G     VFA +G    E N    E K  G L
Sbjct: 150 GKMGLFGGAGVGKTVILMEMINNIAKQHGGIS---VFAGVGERTREGNDLYHEMKDAGVL 206

Query: 210 EKAVVFINLADDPAIERILTPRIALTTAEYLAYEKGMHVLVILTDLTNYCEALREIAAAR 269
           EKA +     ++P   R      AL  AEY    +   VL+ + ++  + +A  E++A  
Sbjct: 207 EKAALIYGQMNEPPGARARVALTALACAEYFRDVENQDVLLFVDNIFRFTQAGSEVSALL 266

Query: 270 NEVPGRRGYPGYMYTDLACLYERAGRVKGKEGTVTQIPILTMPDDDITHPIPDLTGYITE 329
             +P   GY   + TDL  L ER       +G++T +  + +P DD+T P P  T    +
Sbjct: 267 GRMPSAVGYQPTLGTDLGALQERI--TSTTKGSITSVQAVYVPADDLTDPAPATTFSHLD 324

Query: 330 GQIVLSRELNRKGVYPPVDILPSLSRLAGNGQGEGKTRDDHSKVISQAYAAYAEGRGLRD 389
           G +VLSR++   G+YP VD L S SR+            +H  V  Q      + + L+D
Sbjct: 325 GTLVLSRQIAELGIYPAVDPLDSTSRIL----DPNVVGVEHYGVARQVQQVLQKYKDLQD 380

Query: 390 LVAVVGEEALTERDR 404
           ++A++G + L++ D+
Sbjct: 381 IIAILGMDELSDEDK 395