Pairwise Alignments

Query, 159 a.a., 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH from Methanococcus maripaludis S2

Subject, 155 a.a., rRNA large subunit m3Psi methyltransferase RlmH from Pseudomonas stutzeri RCH2

 Score = 92.4 bits (228), Expect = 3e-24
 Identities = 48/159 (30%), Positives = 94/159 (59%), Gaps = 4/159 (2%)

Query: 1   MNVTIISVGKIKEKYLSDAIIEYSKRISRYSKLDIIEVADEKTPENPSDVEKSKILEKEA 60
           M + +I+VG    +++ D   EY+KR+     L++ E+A     +N    + ++++ +E 
Sbjct: 1   MRIKLIAVGSKMPRWVEDGWQEYAKRLPSELPLELHEIALNTRGKN---ADVARLIRQEG 57

Query: 61  ERILKYLKKDSFLITLEILGKELTSEDLAKKINDLSISGKSDITFVIGGSLGLSKNISEI 120
           E +L  ++    ++TLE+ GK  ++E LA +I    +  ++ +  ++GG  GL+  +   
Sbjct: 58  EAMLGKVQPGERIVTLEVHGKPWSTEQLAAEIERWRLDARN-VNLMVGGPEGLAPEVCAR 116

Query: 121 SDFKLSFSKMTFPHQLMRVILLEQIYRSFRIISGEPYHK 159
           S+ + S S +T PH L+R+++ EQIYR++ ++SG PYHK
Sbjct: 117 SEQRWSLSPLTLPHPLVRILIGEQIYRAWTLLSGHPYHK 155