Pairwise Alignments

Query, 159 a.a., 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH from Methanococcus maripaludis S2

Subject, 156 a.a., 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH from Vibrio cholerae E7946 ATCC 55056

 Score = 96.7 bits (239), Expect = 2e-25
 Identities = 50/159 (31%), Positives = 92/159 (57%), Gaps = 4/159 (2%)

Query: 1   MNVTIISVGKIKEKYLSDAIIEYSKRISRYSKLDIIEVADEKTPENPSDVEKSKILEKEA 60
           M + +I+VG    K++ +   EY +R      L+++E+   K  +N    + ++IL+KE 
Sbjct: 1   MKIQLIAVGTKMPKWVEEGFQEYRRRFPHDMPLELVEITAGKRGKN---ADIARILQKEG 57

Query: 61  ERILKYLKKDSFLITLEILGKELTSEDLAKKINDLSISGKSDITFVIGGSLGLSKNISEI 120
           E +L  + K + ++TL+I GK   +E+LA ++    + G+ D++ +IGG  GL+      
Sbjct: 58  EAMLAAVPKGNRIVTLDIPGKRWDTEELAVQLESWKLDGR-DVSILIGGPEGLAPACKAA 116

Query: 121 SDFKLSFSKMTFPHQLMRVILLEQIYRSFRIISGEPYHK 159
           +D   S S +T PH L+RV++ E +YR++ I +  PYH+
Sbjct: 117 ADQSWSLSPLTLPHPLVRVVMAESLYRAWSITTNHPYHR 155