Pairwise Alignments

Query, 159 a.a., 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH from Methanococcus maripaludis S2

Subject, 156 a.a., putative ribosomal RNA large subunit methyltransferase from Phaeobacter inhibens DSM 17395

 Score = 98.6 bits (244), Expect = 4e-26
 Identities = 57/162 (35%), Positives = 90/162 (55%), Gaps = 10/162 (6%)

Query: 1   MNVTIISVGKIK---EKYLSDAIIEYSKRISRYSKLDIIEVADEKTPENPSDVEKSKILE 57
           M V    VG+++   EK L D  IE   R  R   L    + + +  +N         + 
Sbjct: 1   MKVHFCVVGRLRASPEKQLIDDYIERFDRTGRALGLGPCRITEVEDKKNAG-------MA 53

Query: 58  KEAERILKYLKKDSFLITLEILGKELTSEDLAKKINDLSISGKSDITFVIGGSLGLSKNI 117
            EAE + K + K + + TL+  GK L+S D +K++ D   +G+ D+ FVIGG+ G+  ++
Sbjct: 54  AEAELLRKAIPKGAVICTLDERGKLLSSPDFSKRLADWRDTGRQDVAFVIGGADGIDPSL 113

Query: 118 SEISDFKLSFSKMTFPHQLMRVILLEQIYRSFRIISGEPYHK 159
              +DF +S  KM +PH L+RV+L EQIYR+  I++G PYH+
Sbjct: 114 RAEADFSISLGKMVWPHMLVRVLLAEQIYRAATILAGSPYHR 155