Pairwise Alignments

Query, 159 a.a., 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH from Methanococcus maripaludis S2

Subject, 156 a.a., SPOUT methyltransferase superfamily protein (RefSeq) from Shewanella loihica PV-4

 Score = 90.5 bits (223), Expect = 1e-23
 Identities = 46/159 (28%), Positives = 93/159 (58%), Gaps = 4/159 (2%)

Query: 1   MNVTIISVGKIKEKYLSDAIIEYSKRISRYSKLDIIEVADEKTPENPSDVEKSKILEKEA 60
           M + +++VG     +++    EY +R  R    ++IE+   K  +N    + ++IL+KE 
Sbjct: 1   MKLQLVAVGTRMPAWVTTGFEEYQRRFPRDMAFELIEIPAGKRGKN---ADIARILQKEG 57

Query: 61  ERILKYLKKDSFLITLEILGKELTSEDLAKKINDLSISGKSDITFVIGGSLGLSKNISEI 120
           E++L  + K + +++L++ GK  T+ +LA ++N   + G+ D++ +IGG  GL+    + 
Sbjct: 58  EQMLAAIPKGNHIVSLDLPGKNWTTPELATQLNRWQLDGR-DVSLLIGGPEGLAPACKQA 116

Query: 121 SDFKLSFSKMTFPHQLMRVILLEQIYRSFRIISGEPYHK 159
           ++     S +T PH L+RV++ E +YR++ I +  PYH+
Sbjct: 117 ANQSWCLSALTLPHPLVRVLVAESLYRAWSINNNHPYHR 155