Pairwise Alignments

Query, 159 a.a., 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH from Methanococcus maripaludis S2

Subject, 156 a.a., rRNA large subunit methyltransferase (RefSeq) from Shewanella sp. ANA-3

 Score = 92.4 bits (228), Expect = 3e-24
 Identities = 48/159 (30%), Positives = 91/159 (57%), Gaps = 4/159 (2%)

Query: 1   MNVTIISVGKIKEKYLSDAIIEYSKRISRYSKLDIIEVADEKTPENPSDVEKSKILEKEA 60
           M + +I+VG     +++    EY +R  R   L++IE+   K  +N   V   +IL+KE 
Sbjct: 1   MKLQLIAVGTRMPDWVTRGFEEYQRRFPRDMALELIEIPAGKRGKNADIV---RILQKEG 57

Query: 61  ERILKYLKKDSFLITLEILGKELTSEDLAKKINDLSISGKSDITFVIGGSLGLSKNISEI 120
           E++L  + K + ++TL++ GK  T+ +LA  +N   + G+ D++ ++GG  GL+    E 
Sbjct: 58  EQMLAAIPKGNHIVTLDLPGKNWTTPELATAMNKWQLDGR-DVSLLVGGPEGLAPACKEA 116

Query: 121 SDFKLSFSKMTFPHQLMRVILLEQIYRSFRIISGEPYHK 159
           +      S +T PH L+R+++ E +YR++ + +  PYH+
Sbjct: 117 AHQSWCLSALTLPHPLVRIVVAESLYRAWSVNTNHPYHR 155