Pairwise Alignments

Query, 268 a.a., hypothetical protein from Methanococcus maripaludis S2

Subject, 306 a.a., Putative stomatin/prohibitin-family membrane protease subunit YbbK from Pseudomonas fluorescens FW300-N2E2

 Score =  190 bits (482), Expect = 4e-53
 Identities = 104/263 (39%), Positives = 168/263 (63%), Gaps = 8/263 (3%)

Query: 5   LNLLLGIFLLVLIIKSVIIVNQFELGLIFRLGKVRGRLNPGVNFIIPFID-VPIKVDVRT 63
           L L +G+ + +L +   ++   ++   + R G+    L PG+N IIP +D +  K++V  
Sbjct: 7   LLLFIGLVVAILFMGFKVVPQGYQW-TVERFGRYTNTLKPGLNIIIPVMDRIGRKINVME 65

Query: 64  KVIDVPPQEMITRDNAGVRIDAVIYYRVMDVNRAILEVQNFQYAIINLAQTSLRAIIGSL 123
            V+D+PPQE+IT DNA V+IDAV +++V++  +A  EV N ++AI NL QT++R ++GS+
Sbjct: 66  SVLDIPPQEVITADNATVQIDAVCFFQVVNTAQAAYEVNNLEHAIRNLLQTNIRTVLGSM 125

Query: 124 ELDDALNKREFINSQLLETLDRDTDAWGVKVEKVELREIEPPTDIKNAMTQQMKAERLKR 183
           ELD  L++R+ IN +LL T+D  T  WG+K+ ++E+++I PP D+  AM+ QMKAER+KR
Sbjct: 126 ELDAMLSQRDGINEKLLRTVDEATAPWGIKITRIEIKDISPPADLMAAMSGQMKAERIKR 185

Query: 184 AAILEAEGEKQSKILKAQGTAESMKIEAEGQAKAIQIVAESAQNYFKNEAQLYKALDVTS 243
           A ILEAEG + S IL A+G  ++  +EAEG  +A  + +E+ +   + EA    A  V S
Sbjct: 186 AQILEAEGLRASAILTAEGKKQAQILEAEGSRQAAFLESEARERQAQAEA---LATQVVS 242

Query: 244 NTLKDNTKFVISENIMDVAKKFI 266
             + D     ++     VA+K+I
Sbjct: 243 QAIADGNVQAVN---YFVAQKYI 262