Pairwise Alignments

Query, 268 a.a., hypothetical protein from Methanococcus maripaludis S2

Subject, 292 a.a., HflC protein (RefSeq) from Shewanella loihica PV-4

 Score = 79.3 bits (194), Expect = 8e-20
 Identities = 57/245 (23%), Positives = 114/245 (46%), Gaps = 12/245 (4%)

Query: 5   LNLLLGIFLLVLIIKSVIIVNQFELGLIFRLGK------VRGRLNPGVNFIIPFIDVPIK 58
           L++++   L+ + + S+++VN+ E  ++ R GK      V     PG++  +P ID    
Sbjct: 4   LSVIIAAILVAMGLSSLMVVNEGERAIVSRFGKIIKDEGVTRIYKPGLHIKLPVIDKIKY 63

Query: 59  VDVRTKVIDVPPQEMITRDNAGVRIDAVIYYRVMDVNRAILEVQN-----FQYAIINLAQ 113
           +D R + +D      +T +   + +D+ + +R+ D  +  L          +  +     
Sbjct: 64  LDSRIQTMDGAADRFVTSEKKDLMVDSYVKWRIKDHEKYYLATNGGNKVQAESLLQRKIN 123

Query: 114 TSLRAIIGSLELDDALN-KREFINSQLLETLDRDTDAWGVKVEKVELREIEPPTDIKNAM 172
             LR   G   + D ++  R+ +    L          G++V  V +++I  P ++ +++
Sbjct: 124 NDLRTEFGRRTIKDIVSGSRDELQQDALRNASDSAQDLGIEVVDVRVKQINLPANVSSSI 183

Query: 173 TQQMKAERLKRAAILEAEGEKQSKILKAQGTAESMKIEAEGQAKAIQIVAESAQNYFKNE 232
            Q+M+AER   A    A+G++QS+I++A+  A      AE + KA+Q+  E      K  
Sbjct: 184 YQRMRAERTAVAKEHRAQGKEQSEIIRAKTDASVTIQIAEAERKALQVRGEGDAIAAKIY 243

Query: 233 AQLYK 237
           A  YK
Sbjct: 244 ADAYK 248