Pairwise Alignments

Query, 268 a.a., hypothetical protein from Methanococcus maripaludis S2

Subject, 380 a.a., HflK protein (RefSeq) from Shewanella loihica PV-4

 Score = 82.4 bits (202), Expect = 1e-20
 Identities = 65/262 (24%), Positives = 119/262 (45%), Gaps = 15/262 (5%)

Query: 7   LLLGIFLLVLIIKSVIIVNQFELGLIFRLGKVRGRLNPGVNFIIPFIDVPIKVDVRTKVI 66
           ++LGI ++V  +     V + E G+  R GK  G++ PG+ +   FID    V+V + V 
Sbjct: 56  IVLGIAVVVWGLSGFYTVKEAEKGVALRFGKYIGQVEPGLQWKATFIDEVFPVNV-SNVR 114

Query: 67  DVPPQ-EMITRDNAGVRIDAVIYYRVMDVNRAILEVQNFQYAIINLAQTSLRAIIGSLEL 125
            +P    M+T D   V ++  + Y V+D  R +    +   ++     ++LR ++G  ++
Sbjct: 115 SIPASGSMLTADENVVLVELDVQYIVVDAYRYLFSAVDANSSLREATDSALRYVVGHNKM 174

Query: 126 DDALNK-REFINSQLLETLDRDTDAW--GVKVEKVELREIEPPTDIKNAMTQQMKAERLK 182
           DD L   R+ I     E ++R    +  G+++  V      PP ++K+A    + A+  +
Sbjct: 175 DDILTTGRDQIRRDTWEEVERIIKPYNLGIEIRDVNFLPARPPEEVKDAFDDAIAAQEDE 234

Query: 183 RAAILEAEGEKQSKILKAQGTAESMKIEAEGQAKAIQIVAESAQNYFKNEAQLYKA---- 238
           +  I EAE   +    KA+GT + M+ +A    +   + A      F+     YKA    
Sbjct: 235 QRFIREAEAYSREVEPKARGTVQRMEQQANAYKEREILEARGKVARFEKLLPEYKAAPEV 294

Query: 239 ------LDVTSNTLKDNTKFVI 254
                 +D  SN L    K ++
Sbjct: 295 TRARLYIDAMSNVLSGTNKVLV 316