Pairwise Alignments

Query, 268 a.a., hypothetical protein from Methanococcus maripaludis S2

Subject, 324 a.a., membrane protease family, stomatin/prohibitin-like protein from Caulobacter crescentus NA1000

 Score =  196 bits (497), Expect = 7e-55
 Identities = 101/235 (42%), Positives = 157/235 (66%), Gaps = 1/235 (0%)

Query: 1   MSFWLNLLLGIFLLVLIIKSVIIVNQFELGLIFRLGKVRGRLNPGVNFIIPFID-VPIKV 59
           MS  + L+   F  VL+  ++ IV Q     + R G+    L PG+  + PF++ V  +V
Sbjct: 1   MSGIVVLVFLAFAFVLLFSAIKIVPQGREFTVERFGRYTRTLKPGITILTPFLETVGRRV 60

Query: 60  DVRTKVIDVPPQEMITRDNAGVRIDAVIYYRVMDVNRAILEVQNFQYAIINLAQTSLRAI 119
           ++  +V+DVP QE+IT+DN  V++DA+++ +VMD   A   V N  YAI  LAQT+LR +
Sbjct: 61  NMMEQVLDVPQQEVITKDNVSVKVDAIVFIQVMDAAAAAYRVDNLMYAITQLAQTNLRTV 120

Query: 120 IGSLELDDALNKREFINSQLLETLDRDTDAWGVKVEKVELREIEPPTDIKNAMTQQMKAE 179
           +G++ELD+ L++R+ INS+LL T+D  T  WGVKV ++E++++ PP DI NAM +QMKAE
Sbjct: 121 VGAMELDEVLSQRDAINSRLLSTIDHATGPWGVKVARIEIKDLTPPADITNAMARQMKAE 180

Query: 180 RLKRAAILEAEGEKQSKILKAQGTAESMKIEAEGQAKAIQIVAESAQNYFKNEAQ 234
           R +RA I EAEGEKQ++I +A+G  +S  ++AEG+ +A    AE+ +   + EA+
Sbjct: 181 RERRAVITEAEGEKQAQIARAEGQKQSAILQAEGRREAAFRDAEAREREAEAEAK 235