Pairwise Alignments

Query, 268 a.a., hypothetical protein from Methanococcus maripaludis S2

Subject, 297 a.a., HflC protein (RefSeq) from Shewanella sp. ANA-3

 Score = 85.5 bits (210), Expect = 1e-21
 Identities = 60/235 (25%), Positives = 115/235 (48%), Gaps = 16/235 (6%)

Query: 5   LNLLLGIFLLVLIIKSVIIVNQFELGLIFRLG-----KVRGR-----LNPGVNFIIPFID 54
           L+++L   +L + + SV++VN+ E  ++ R G     KV G+       PG++F +P ID
Sbjct: 4   LSIVLIAIVLGIGLSSVMVVNEGERAIVARFGEIVKDKVDGKPVTRVFAPGIHFKVPVID 63

Query: 55  VPIKVDVRTKVIDVPPQEMITRDNAGVRIDAVIYYRVMDVNRAILEVQ-----NFQYAII 109
               +D R + +D      +T +   + +D+ + +R+ D  +  L        N +  + 
Sbjct: 64  KVKLLDARIQTLDGAADRFVTSEKKDLMVDSYVKWRIFDFEKYYLSTNGGIKSNAETLLQ 123

Query: 110 NLAQTSLRAIIGSLELDDALN-KREFINSQLLETLDRDTDAWGVKVEKVELREIEPPTDI 168
                 LR   G   + + ++ KR+ + +  LE         G++V  V +++I  P ++
Sbjct: 124 RKINNDLRTEFGRRTIKEIVSGKRDELQNDALENASESAKDLGIEVVDVRVKQINLPANV 183

Query: 169 KNAMTQQMKAERLKRAAILEAEGEKQSKILKAQGTAESMKIEAEGQAKAIQIVAE 223
            N++ Q+M+AER   A    A+G++QS+I++A   A      AE + KA+ I  E
Sbjct: 184 SNSIYQRMRAERQAVAKEHRAQGKEQSEIIRATIDANVTVKIAEAERKALTIRGE 238