Pairwise Alignments

Query, 268 a.a., hypothetical protein from Methanococcus maripaludis S2

Subject, 381 a.a., HflK protein (RefSeq) from Shewanella sp. ANA-3

 Score = 77.4 bits (189), Expect = 4e-19
 Identities = 66/269 (24%), Positives = 122/269 (45%), Gaps = 19/269 (7%)

Query: 2   SFWLNLLLGIFLLVLIIKSVIIVNQFELGLIFRLGKVRGRLNPGVNFIIPFIDVPIKVDV 61
           SF L ++L I  +V  +     + + E G+  R G+  G + PG+++   FID    VDV
Sbjct: 52  SFSLIIILAIAFVVWGLSGFYTIKEAERGVALRFGQHIGEVGPGLHWKATFIDQIYPVDV 111

Query: 62  RTKVIDVPPQ-EMITRDNAGVRIDAVIYYRVMDVNRAILEVQNFQYAIINLAQTSLRAII 120
           ++ V  +P    M+T D   V+++  + YR++D    +    +   ++     ++LR +I
Sbjct: 112 QS-VRSIPASGSMLTSDENVVKVELDVQYRILDAYSYLFSAVDANASLREATDSALRYVI 170

Query: 121 GSLELDDALNK-REFINSQLLETLDRDTDAW--GVKVEKVELREIEPPTDIKNAMTQQMK 177
           G  ++DD L   R+ I     + L+R  + +  G+ +  V      PP ++K+A    + 
Sbjct: 171 GHNKMDDILTTGRDAIRRDTWKELERIIEPYKLGLAIVDVNFLPARPPEEVKDAFDDAIA 230

Query: 178 AERLKRAAILEAEGEKQSKILKAQGTAESMK-----------IEAEGQAKAIQIVAESAQ 226
           A+  ++  I EAE   +    KA+G  E M            +EA G+    +++    Q
Sbjct: 231 AQEDEQRFIREAEAYAREVEPKARGEVERMAQQANAYKEREILEARGKVARFELLLPEYQ 290

Query: 227 NYFK-NEAQLYKALDVTSNTLKDNTKFVI 254
              +    +LY  LD     + D  K +I
Sbjct: 291 AAPEVTRKRLY--LDAMQQVMTDTNKVLI 317