Pairwise Alignments

Query, 137 a.a., hypothetical protein from Methanococcus maripaludis S2

Subject, 459 a.a., Membrane-bound serine protease (ClpP class) from Pseudomonas stutzeri RCH2

 Score = 52.4 bits (124), Expect = 8e-12
 Identities = 44/157 (28%), Positives = 74/157 (47%), Gaps = 29/157 (18%)

Query: 4   GYITIIIGMGLILLEAFLPGLNF-PVAGVAVLIYGIFLLY---APQFALPSAILA--GLI 57
           G   I++G+  ++ E FLP      + GVA  + G  +L     P F +P +++   G+I
Sbjct: 305 GVALILLGIAFMVAEGFLPSFGMLGIGGVAAFVTGAVILIDTDVPGFGIPLSLIVPLGII 364

Query: 58  TAYIMKRFVYKTGLNVKIGAENLIGEHGD--------LVDEIDENN--YGHVIIHGEKWQ 107
           +A ++   V    + +K   + L+   GD        LVD +   N   G V +HGE WQ
Sbjct: 365 SALLVFALV---AMALKARRQRLVS--GDSALIGSLVLVDAVPTQNPHSGWVHLHGENWQ 419

Query: 108 AKSENPIKKGSKVIVVGIEGVSLII--------EELN 136
            +S   ++ G +V V+  +G+ L +        EELN
Sbjct: 420 VRSTTALQVGQQVRVIARDGLQLEVAPPSATNREELN 456