Pairwise Alignments

Query, 200 a.a., TetR/AcrR family transcriptional regulator from Methanococcus maripaludis S2

Subject, 210 a.a., Transcription repressor of multidrug efflux pump acrAB operon, TetR (AcrR) family from Pseudomonas fluorescens FW300-N2E2

 Score = 51.2 bits (121), Expect = 1e-11
 Identities = 40/171 (23%), Positives = 74/171 (43%), Gaps = 8/171 (4%)

Query: 1   MSTKEKIVQNAAKLFLTKGYKQTSLNEIAEKTGITKGGIYHHFKDKNELFVEMAEYFKSK 60
           + T+ +I++ A K F  +G  +T+L +IA   G+T+G IY HF +K +L   M +     
Sbjct: 10  LETRSQILEAAEKAFFERGVARTTLADIATLAGVTRGAIYWHFSNKADLLQAMLDTLHEP 69

Query: 61  FASLLTKMEQESSLEDLLKNYFENSEIVMQEIAEYLELTLKDIK-HFSEFQSRFTLDAIQ 119
              L    E E  L+ L        ++  Q   +     + +I  H  EF        ++
Sbjct: 70  LDDLARASENEEELDPLGCTRKLLVQLFQQVALDPKTRRINEILFHKCEFTDEMC--DLR 127

Query: 120 YGPEDMDFTMHTKSMYSLLKKKIELAKKNGEILEDIDTKEISLEIIAIIEG 170
                +    + + + SL       A K G++ +D+D +  ++ I   I+G
Sbjct: 128 QQRRQVSLDCNVRIVLSLSN-----AMKRGQLPDDLDPERAAIAIHGYIDG 173