Pairwise Alignments

Query, 388 a.a., MMPL family transporter from Methanococcus maripaludis S2

Subject, 791 a.a., RND transporter from Pseudomonas fluorescens FW300-N2E3

 Score = 80.9 bits (198), Expect = 1e-19
 Identities = 59/239 (24%), Positives = 106/239 (44%), Gaps = 13/239 (5%)

Query: 126 NNDVIPNDVATVKTIYQNLPESSRDGIFNNDYSMVVVYATTDAGTDDKKILVKDINSRLD 185
           N DV+ N +A    +Y N    +   +F ND+    +     A  D  K   KD      
Sbjct: 544 NPDVLNNSIARADGLYNNSCSLAPVLVFLNDHKAETLDRAVHAVQDFAKENNKD------ 597

Query: 186 EAPIPPGVE-VITTGTPALSELLKRMMDESQAVTGLASLLAIFTILLLYFRNIVKSVLPL 244
                 G+E ++  G   +      ++ ES+    +   + + T+ ++ FR+   ++  +
Sbjct: 598 ------GLEFILAAGNAGIEAATNEVIKESELTILVLVYICVATMCMITFRSWAATLCIV 651

Query: 245 IPVVVAVIWAAGSMAIFKIPMDTATSVMGSLLLGLGIDYGVHLFHRYEEELGDGKSMDEA 304
           +P+V+  +     MA   I +  AT  + +L +G+G+DYG++++ R E  L  G  + EA
Sbjct: 652 LPLVLTSVLGNALMAFMGIGVKVATLPVVALGVGIGVDYGIYIYSRLESFLRAGLPLQEA 711

Query: 305 INIAVVSTGSAVLVTTATTMAGFAALTIAPLSMMANMGKVCTLGIFFCMAAVICLLPPL 363
               + STG AVL T      G      + +   A+MG + T  + + M   + LLP L
Sbjct: 712 YYQTLKSTGKAVLFTGLCLAIGVCTWIFSAIKFQADMGLMLTFMLLWNMFGALWLLPAL 770



 Score = 58.9 bits (141), Expect = 5e-13
 Identities = 78/371 (21%), Positives = 153/371 (41%), Gaps = 32/371 (8%)

Query: 21  VVAVVIVLTIFMAFLATGIESQTDYEKMVPQDDPVIVALNEIRDEFGGT-ETIMLGVKLV 79
           V+ + ++++IF+ + AT I   T +EKM+P   P I  + E R++      T+ + V+  
Sbjct: 23  VIVICLLVSIFLFWQATLIRPSTSFEKMIPLKHPFIEKMLEHRNDLANLGNTVRISVEAT 82

Query: 80  PSD--SSEKVTDIRDPRVLDLVDFLEQ-DIGSMDMITSVSSR-ADILKA--YNNDVIPND 133
             D  S E +  +R  ++ D V ++   D   +  + S S R  ++ +      +VIP  
Sbjct: 83  DGDIFSREYMETLR--QINDEVFYISGVDRSGLKSLWSPSVRWTEVTEEGFAGGEVIPQS 140

Query: 134 ----VATVKTIYQNLPESSRDG-IFNNDYSMVVV----YATTDAGTDDKKILVKDINSRL 184
                 ++  +  N+ +S + G +  ND+   +V      +     D  K+L  D     
Sbjct: 141 YNGSADSLDQLRNNVLKSGQVGRLVANDFKSSIVDIPLLESYPDPQDQGKLLALDYQKFS 200

Query: 185 DEAPIP---------PGVEVITTG-TPALSELLKRMMDESQAVTGLASLLAIFTILLLYF 234
            E             P V++   G    + +L+  ++     V        I  ILLL+F
Sbjct: 201 HELEDKIRDKFEKQNPNVQIHIVGFAKKVGDLIDGLI---MVVMFFGVAFVITLILLLWF 257

Query: 235 RNIVKSVLPLIPV-VVAVIWAAGSMAIFKIPMDTATSVMGSLLLGLGIDYGVHLFHRYEE 293
            N ++S + ++   +VAV+W  G M  F   +D  + ++  L+  +GI +GV   +    
Sbjct: 258 TNCLRSTVAVLSTTLVAVVWQLGLMHAFGFGLDPYSMLVPFLIFAIGISHGVQKINGIAL 317

Query: 294 ELGDGKSMDEAINIAVVSTGSAVLVTTATTMAGFAALTIAPLSMMANMGKVCTLGIFFCM 353
           +  D  +   A            ++       GF  L I  + ++  +    ++G+   +
Sbjct: 318 QSSDADNALTAARRTFRQLFLPGMIAILADAVGFITLLIIDIGVIRELAIGASIGVAVIV 377

Query: 354 AAVICLLPPLI 364
              + LLP  I
Sbjct: 378 FTNLILLPVAI 388