Pairwise Alignments

Query, 388 a.a., MMPL family transporter from Methanococcus maripaludis S2

Subject, 784 a.a., adhesin-associated MmpL efflux pump (from data) from Pseudomonas stutzeri RCH2

 Score = 82.4 bits (202), Expect = 4e-20
 Identities = 69/303 (22%), Positives = 131/303 (43%), Gaps = 4/303 (1%)

Query: 62  IRDEFGGTETIMLGVKLVPSDSSEKVTDIRDPRVLDLVDFLEQDIGSMDMITSVSSRADI 121
           IR+    ++ +++ VK  P   S   T      + +L+  ++   G    ++ VS     
Sbjct: 471 IRNYSTSSDVLVVMVKTAPEGCSHYDTLAA---MDELMWKMQNTEGVQSAVSMVSVARQG 527

Query: 122 LKAYNNDVIPNDVATVKTIYQNLPESSRDGIFNNDYSMVVVYATTDAGTDDKKILVKDIN 181
           +K  N   +  +  +      N   +  +G++N+D S+  V    +    +    V    
Sbjct: 528 IKGMNEGSLKWETLSRNPHVLNNSIARAEGMYNSDCSLAPVLVFLNDHKAETLEHVVAAA 587

Query: 182 SRLDEAPIPPGVE-VITTGTPALSELLKRMMDESQAVTGLASLLAIFTILLLYFRNIVKS 240
               E     G+E V+  G   +      ++  S+    +A  LA+  + LL FR++  +
Sbjct: 588 KDFAEENNREGLEFVLAAGNAGIEAATNEVIAASETTMLIAVYLAVSIMCLLTFRSLAAT 647

Query: 241 VLPLIPVVVAVIWAAGSMAIFKIPMDTATSVMGSLLLGLGIDYGVHLFHRYEEELGDGKS 300
           +  ++P+V+  I     MA   + +  AT  + +L +G+G+DYG++++ R E  L  G +
Sbjct: 648 LCVILPLVLTSILGNALMAFMGVGVKVATLPVIALGVGIGVDYGIYIYSRLESFLRQGMT 707

Query: 301 MDEAINIAVVSTGSAVLVTTATTMAGFAALTIAPLSMMANMGKVCTLGIFFCMAAVICLL 360
           + EA    + STG AV+ T      G      + +   A+MG + T    + M   I LL
Sbjct: 708 LQEAYYQTLKSTGKAVIFTGVCLAIGVVTWVFSAIKFQADMGMMLTFMFLWNMVGAIWLL 767

Query: 361 PPL 363
           P L
Sbjct: 768 PAL 770



 Score = 59.3 bits (142), Expect = 4e-13
 Identities = 80/374 (21%), Positives = 159/374 (42%), Gaps = 38/374 (10%)

Query: 21  VVAVVIVLTIFMAFLATGIESQTDYEKMVPQDDPVIVALNEIRDEFGGT-ETIMLGVKLV 79
           VV + ++++ F+ + A  +  QT +EKM+P   P I  + E +++      T+ + V+ V
Sbjct: 23  VVVLCLLISAFLFYQAAQVRPQTSFEKMIPLAHPYIQKMLEHQNDLANLGNTVRISVEAV 82

Query: 80  PSD--SSEKVTDIRDPRVLDLVDFLEQ-DIGSMDMITSVSSR-ADILKA--YNNDVIPND 133
             D  S E +  +R  ++ D V ++   D  +M  + S S R  ++ +      +VIP  
Sbjct: 83  EGDIFSKEYMETLR--QIHDEVFYIHGVDRSNMKSLWSPSVRWTEVTEEGFAGGEVIPQT 140

Query: 134 V----ATVKTIYQNLPESSRDG--IFNNDYSMVVVYATTDAGTDDK------KILVKDIN 181
                 ++  +  N+ +S + G  + NN  S ++     ++  D +      K+  +  +
Sbjct: 141 YDGSPESLDDLRDNILKSGQIGRLVANNFKSSIIDVPLLESYPDPEDQSRQIKLDYQKFS 200

Query: 182 SRLDEA------PIPPGVEVITTGTPALSELLKRMMDESQAVTGLASL----LAIFTILL 231
             L+E          P V+V   G        K++ D    + G+A      + I  +LL
Sbjct: 201 HELEEKIREKYQAQNPNVKVHIIG------FAKKVGDLIDGLVGVALFFIVAIGITFVLL 254

Query: 232 LYFRNIVKSVLP-LIPVVVAVIWAAGSMAIFKIPMDTATSVMGSLLLGLGIDYGVHLFHR 290
           L+F   +KS +  LI  ++AV W  G +      +D  + ++  L+  +GI +GV   + 
Sbjct: 255 LWFTRCLKSTIAVLITTLIAVTWQLGLLHTLGFGLDPYSMLVPFLVFAIGISHGVQKING 314

Query: 291 YEEELGDGKSMDEAINIAVVSTGSAVLVTTATTMAGFAALTIAPLSMMANMGKVCTLGIF 350
                G  +    A  +A        +V   +   GF  L +  + ++  +    +LG+ 
Sbjct: 315 IAMASGYTEDPVTAARMAFRQLFIPGMVALLSDAVGFVTLLLIDIGVIRELAIGASLGVA 374

Query: 351 FCMAAVICLLPPLI 364
             +   + LLP  I
Sbjct: 375 VIILTNLILLPVAI 388