Pairwise Alignments

Query, 388 a.a., MMPL family transporter from Methanococcus maripaludis S2

Subject, 889 a.a., hypothetical protein (NCBI) from Rhodospirillum rubrum S1H

 Score = 57.8 bits (138), Expect = 1e-12
 Identities = 59/264 (22%), Positives = 114/264 (43%), Gaps = 25/264 (9%)

Query: 130 IPNDVATVKTIYQNLPE--SSRDGIFNNDYSMVVVYATTDAGTDDKKILVKDINSRL--- 184
           +PND A ++ +   L +  + +  +F +  +   V A        ++ +  D  +RL   
Sbjct: 633 LPNDTALLRALDDRLLDGLAHQLALFRDGLNAQPVSADDIPPELRRRYMAADGRARLEVF 692

Query: 185 ------DEAPIPPGVEVITTGTPALSELLKRMMDESQAVTGL------ASLLAIFTILLL 232
                 D A +   VE + T  P  +     +++  + V G        S + I  +L +
Sbjct: 693 PRATARDYATLARFVEAVRTVAPDATGAPVLIIEAGRTVMGAFVEAAAISAVLIAIMLAI 752

Query: 233 YFRNIVKSVLPLIPVVVAVIWAAGSMAIFKIPMDTATSVMGSLLLGLGIDYGVHLFHRYE 292
             R+    VL   PV++A     G+  +     + A  ++  LL+GLG+  G+++  R  
Sbjct: 753 SLRSGRAVVLIFAPVILAGTLTIGASVLAGQAFNFANVIVLPLLVGLGVSGGIYVVERTR 812

Query: 293 EELGDGKSMDEAINIAVVSTGSAVLVTTATTMAGFAALTIAPLSMMANMGKVCTLGIFFC 352
           EE   G ++         ST  AV+ +  TT+A F ++ ++     A+MG + T+ +   
Sbjct: 813 EERDSGTAL-------ASSTPRAVMFSAFTTIASFGSIALSSHPGTASMGILLTIALGLS 865

Query: 353 MAAVICLLPPLIVI-EERYTRPFL 375
           +   +  LP L+ +  ER  +P L
Sbjct: 866 LLCTLAFLPALVALWPERRRQPSL 889



 Score = 39.7 bits (91), Expect = 3e-07
 Identities = 41/178 (23%), Positives = 72/178 (40%), Gaps = 9/178 (5%)

Query: 192 GVEVITTGTPALSELLKRMMDESQAVTGLASLLAIFTILLLYFRNIVKSVLPLIPVVVAV 251
           G+ +  TG  AL +     +       GL + + +  IL +   +       L+ +   +
Sbjct: 274 GITLRITGPAALDQEELASVSTGMDRAGLVTTVLVAIILAVGLGSGRLIFATLMTMGAGL 333

Query: 252 IWAAGSMAIFKIPMDTATSVMGSLLLGLGIDYGVHLFHRYEEELGDGKSMDEAINIAVVS 311
           +   G  A     ++  +     L +GL +D+G+H   RY E    G     A+  A   
Sbjct: 334 LMTIGFAAAAVGTLNLISVAFAVLFIGLSVDFGIHFGLRYREGRDRGLENGLALEGAARG 393

Query: 312 TG-SAVLVTTATTMAGFAALTIAPLSMMANMGKVCTLGIFFC-------MAAVICLLP 361
            G S  LV  A   A FA L    L  +A +G +  +G+F         +A+++ L+P
Sbjct: 394 AGRSQFLVALAAAFAFFAFLPTDYLG-LAQLGLISGVGMFIALLINQSTLASLMTLMP 450