Pairwise Alignments

Query, 388 a.a., MMPL family transporter from Methanococcus maripaludis S2

Subject, 767 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score = 76.3 bits (186), Expect = 3e-18
 Identities = 69/285 (24%), Positives = 125/285 (43%), Gaps = 24/285 (8%)

Query: 95  VLDLVDFLEQDIGSMDMITSVSSRADILKAYNN---------DVIPNDVATVKTIYQNLP 145
           VL  +D  E  + +   + S +S A I K  N           V+P   A++      +P
Sbjct: 482 VLTQIDEFEWLVANTPGVESTASLASIAKRVNAGFNEGNPKWQVLPRTTASLVQAVGQIP 541

Query: 146 ESSRDGIFNNDYSMVVVY-------ATTDAGTDDKKILVKDINSRLDEAPIPPGVEVITT 198
            +S  G+ + + S++ VY       A T     DK   VK +++++D   +      + +
Sbjct: 542 TTS--GLLDGNCSVMPVYLFLKDHKAETIEQVIDK---VKTLSAKMDSDKLK---FKLAS 593

Query: 199 GTPALSELLKRMMDESQAVTGLASLLAIFTILLLYFRNIVKSVLPLIPVVVAVIWAAGSM 258
           G   +       + E+Q    L    A+F + L+ FR+I  +V  ++P+ V    A   M
Sbjct: 594 GPVGVMAATNEAVAEAQLPMMLYVYGAVFVLCLISFRSIRATVAVILPLYVVSTLAQALM 653

Query: 259 AIFKIPMDTATSVMGSLLLGLGIDYGVHLFHRYEEELGDGKSMDEAINIAVVSTGSAVLV 318
               I +  +T  + +L +G+G+DYG+++      +L DG  +  A + A++  GSAV+ 
Sbjct: 654 TQLDIGLAVSTLPVIALGVGIGVDYGIYILSTMAVKLRDGMPVQTAYHQALIERGSAVIF 713

Query: 319 TTATTMAGFAALTIAPLSMMANMGKVCTLGIFFCMAAVICLLPPL 363
           T  T   G +    + L    +MG + T      M   I +LP +
Sbjct: 714 TGLTLAIGVSTWFFSALKFQMDMGILLTFMFLVNMLGAIIILPAI 758



 Score = 68.2 bits (165), Expect = 8e-16
 Identities = 80/397 (20%), Positives = 170/397 (42%), Gaps = 50/397 (12%)

Query: 4   EKILQKIAEASERHPLKVVAVVIVLTIFMAFLATGIESQTDYEKMVPQDDPVIVALNEIR 63
           +K++  +     R    V+   ++ T+F+ F A+ ++    + K +P +   +    + +
Sbjct: 3   DKLVNGLESFLFRQRAYVIFAFLLATLFLGFQASHLKMDAAFVKNIPLNHSYMQTYLKHQ 62

Query: 64  DEFGGTETIMLGVKLVPSDSSEKVTDIRDPRVLDLVDFLEQDIGSMDMITSVSSRADILK 123
            +FGG  +IM+ V+    DSS  + +       +  D L+Q    +  I  V  RA +  
Sbjct: 63  KQFGGANSIMVAVE----DSSGNIFN------PNFFDTLKQVHDQLFFIPGV-DRAQVKS 111

Query: 124 AYN---------------NDVIPNDVAT----VKTIYQNLPESSRDG-IFNNDYSMVVVY 163
            Y+                 VIP D +T    ++ +  N+ ++   G +   DYS  +V 
Sbjct: 112 LYSPSTRFTEVVEDGFAGGPVIPADFSTTPAGLEVVRSNIEKAGIVGRLIAEDYSAAMVT 171

Query: 164 ATT---DAGTDD-------KKILVKDINSRLDEAPIPPGVEVITTGTPALSELLKRMMDE 213
           A     D  T +          L K++  + +   I   + +I       +++   + + 
Sbjct: 172 AQLMDFDPQTGEPLDTLAFASQLEKELRGQYENDKIK--IHII-----GFAKMAGDVAEG 224

Query: 214 SQAVTGLASLLAIFTILLLY-FRNIVK-SVLPLIPVVVAVIWAAGSMAIFKIPMDTATSV 271
           ++ V    ++  + T +++Y F + VK ++LPL+  +VAV+W  G + +    +D  + +
Sbjct: 225 AKGVVLFFAIAILVTAVMVYLFSHSVKLTLLPLVCSLVAVVWQLGLLTVVGFGLDPMSIL 284

Query: 272 MGSLLLGLGIDYGVHLFHRYEEELGDGKSMDEAINIAVVSTGSAVLVTTATTMAGFAALT 331
           +  L+  +G+ +GV + +     +G+G++   A  +A  S      V   +   GF  L 
Sbjct: 285 IPFLVFAIGVSHGVQMINAVRRRVGEGETTKAAAALAFRSLLIPGGVALLSDTVGFMTLL 344

Query: 332 IAPLSMMANMGKVCTLGIFFCMAAVICLLPPLIVIEE 368
              + ++  +    +LG+   +   + LLP LI   E
Sbjct: 345 AIDIGIIRELAISASLGVAVIILTNLVLLPLLISFTE 381