Pairwise Alignments

Query, 523 a.a., COG1361 S-layer family protein from Methanococcus maripaludis S2

Subject, 419 a.a., COG1361 S-layer family protein from Methanococcus maripaludis JJ

 Score = 62.8 bits (151), Expect = 2e-14
 Identities = 84/375 (22%), Positives = 156/375 (41%), Gaps = 56/375 (14%)

Query: 1   MSKLSKIILAIGLLSILATA------------VSALEIDEPQYNPNVIHPGDDVDVWIDV 48
           MS    II +I LL +L+ A            +S + I+    +P     GD  +V I V
Sbjct: 1   MSFKKIIISSITLLMLLSVAMAPVYAETSISDISLVSINLVNQDPTPAVGGDIFEVRIGV 60

Query: 49  ANDEGSDEIIEDLRISVESNYPFEV---KQVNPTKGVYEISQLNEGESDTAYFKLRINDD 105
            N+ G      D  + ++ +YPF+    ++++   G  +  Q ++ E     FKLR+N++
Sbjct: 61  KNEGGKSA--GDYILELDPSYPFQKVAGEELSKEIGFLDKYQDDDKEIIITAFKLRVNEE 118

Query: 106 ASSRDYRLDVTVSYDIVEYDGDDRQVISKSYTKIYYIPVYGLANFEINSDGVTLTPAKTE 165
            +S +Y L V     ++   GD   +    Y     + V    N E+      L P +  
Sbjct: 119 VTSGNYPLKV-----LLYKKGD---LTKTGYKTELTVDVGNKENAEVMLSTSELNPGENS 170

Query: 166 NVQIKVTNKGTGTAKEATLTIGS-NNLINPIDT--TKF--YLGSLSPDITKLLSLNLHAS 220
            +   + N G+   K+ T +  +  N I P+ +  T+F  Y+G    +    L  ++ A 
Sbjct: 171 KLTFTIKNAGSAPLKDLTFSWDTPENKILPLGSGNTRFVKYIG---VNQAVNLDYDVMAG 227

Query: 221 GDATEGSYLIPATLSWIDSDGTENSEVI---NIGFIVEGDINLGISNVITDPTEIKAQET 277
            D   G Y I   L++ D+  +    +I    I  + + D  +  S  + D         
Sbjct: 228 SDIEPGLYKINMYLNYEDTINSSEKNIIQDAGIHILEKADFEIAFSENLDD--------- 278

Query: 278 YVKIDVDLTNNGHGEAKNIEIDLLSEYPFKDSWS--NSNFKNIGTLTSGDTKTATFYIDV 335
                  + N G+ + K++ + +    P +D W+   SN   IG L +GD   A+F +  
Sbjct: 279 --SYTFSIMNVGNSDTKSVSMYI----PKQDGWTIIGSNNAIIGNLDAGDYTYASFNLLA 332

Query: 336 DKDAEAKHYAVPLNI 350
           D   +++   +P+ +
Sbjct: 333 DSSNQSE---IPIKV 344