Pairwise Alignments

Query, 321 a.a., AI-2E family transporter from Methanococcus maripaludis S2

Subject, 353 a.a., membrane protein, putative from Pseudomonas fluorescens FW300-N2E2

 Score =  116 bits (291), Expect = 7e-31
 Identities = 82/324 (25%), Positives = 157/324 (48%), Gaps = 24/324 (7%)

Query: 1   MVFSFFALIYMLWPFMGIIALAVAVAYMTKPLYDILKPKFG------RTYGAIICLLGIV 54
           +V    A I++L PF G +  AV +  +  P+   L+ KFG        +   IC++  +
Sbjct: 15  LVLVTIAFIWILLPFYGAVFWAVILGIVFAPMQRRLQLKFGWHRNVTSLFTLSICVVSAI 74

Query: 55  IPSLLLVVLVAEDVVTFLLSL-----DIENIITKVTPILNDIGYLRVDGPDVSKPFSDIW 109
           +P +++  L+ ++      SL     DI + + +    L       +D   +        
Sbjct: 75  LPVIIISTLLVQEGAALYKSLESGELDIADYLARFKDALPPYFQHLLDRFGLGNLNGLRD 134

Query: 110 SVSKPLLNS---FASQISSIPS----LLMKLLFLSFMTFYFLKDGDKLTDSFLIYVP--E 160
            + +  +     FA+Q  S        ++    + ++ F+FL+DG +L     + +P  E
Sbjct: 135 KIVRSAMQGSEFFATQAFSFGQGTFQFMVSFFVMIYLLFFFLRDGAELVRKVRMAIPLAE 194

Query: 161 DKKRNTALFLSEIHKALKTLFIGNAVTSVIVGIISIIGYWLIGIPNPITLGALSGILNIL 220
            +KR   L   + ++ ++    GN + ++  G +  + +W++GI   +    L   L++L
Sbjct: 195 HQKRRLQL---KFNRVVRATVKGNLLVAISQGALGGLIFWVLGISTVLPWAVLMAFLSLL 251

Query: 221 PVVGGWTIYVPLTVYYLLTGEIAKGILLGLFGIIFLSLAPDFAIRPRVISKDGDLHPALV 280
           P VG   ++ P+ VY+LL+G I +G++L LFG+  + L  +F +RP ++ KD  +   +V
Sbjct: 252 PAVGAGLVWAPVAVYFLLSGAIWQGVVLTLFGVFVIGLVDNF-LRPILVGKDTKMPDYMV 310

Query: 281 LIAFLIGPLVFGIPGLAIGPIIVA 304
           L++ L G  VFG+ G  IGP+I A
Sbjct: 311 LVSTLGGLAVFGLNGFVIGPLIAA 334