Pairwise Alignments

Query, 321 a.a., AI-2E family transporter from Methanococcus maripaludis S2

Subject, 361 a.a., AI-2E family transporter from Vibrio cholerae E7946 ATCC 55056

 Score = 95.5 bits (236), Expect = 2e-24
 Identities = 74/334 (22%), Positives = 149/334 (44%), Gaps = 27/334 (8%)

Query: 1   MVFSFFALIYMLWPFMGIIALAVAVAYMTKPLYDILKPKF------GRTYGAIICLLGIV 54
           ++ S  A  +++ P++  I +A  ++ +  P++D  + K             ++  + IV
Sbjct: 18  LLASALACYWLVEPYINSIIMAFIISLLMFPIHDWFEKKLPSHNNLAAFLSCVVLTVIIV 77

Query: 55  IPSLLLVVLVAEDVVTFLLSLDIENIITKVTPILNDIGYLRVDGPDVSKPFSDIWSVSKP 114
           IP L +   + +    F  +L        +  + N    ++  G  ++  +     +S  
Sbjct: 78  IPLLFIFGAIVQQGSKFSQNLYAWVTQGGIQALFNHPWVVK--GLSLANHYLPFEEISPQ 135

Query: 115 LL--------NSFASQISSIP--------SLLMKLLFLSFMTFYFLKDGDKLTDSFLIYV 158
            +         +F S + SI         S +M    + F+ F+ L+D DK+  +    +
Sbjct: 136 QIAQRIGQFATTFGSNLVSISAKILGDATSFVMHFFLMLFVLFFLLRDHDKIISAIRHIL 195

Query: 159 PEDKKRNTALFLSEIHKALKTLFIGNAVTSVIVGIISIIGYWLIGIPNPITLGALSGILN 218
           P  + +   L LSEI    K+  +G+ +T++  G+   IG WL G P  +  G + G  +
Sbjct: 196 PLSRSQEDRL-LSEIENVSKSAVMGSFLTAIAQGVAGGIGMWLAGFPG-LFWGTMMGFAS 253

Query: 219 ILPVVGGWTIYVPLTVYYLLTGEIAKGILLGLFGIIFLSLAPDFAIRPRVISKDGDLHPA 278
            +PVVG   I++P T+Y  LTG+    I L ++ +  +  + D  +RP ++     ++  
Sbjct: 254 FIPVVGTALIWIPATLYLFLTGDTTWAIFLAIWSVAVVG-SIDNLLRPFLMQGSAGMNTL 312

Query: 279 LVLIAFLIGPLVFGIPGLAIGPIIVATVYAIHKV 312
           ++  + L G  +FG+ GL  GP+I A    +  +
Sbjct: 313 MIFFSLLGGIQLFGLIGLIYGPLIFAITMVLFNI 346