Pairwise Alignments

Query, 492 a.a., 2-isopropylmalate synthase from Methanococcus maripaludis S2

Subject, 608 a.a., HMGL-like domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  122 bits (306), Expect = 4e-32
 Identities = 119/435 (27%), Positives = 195/435 (44%), Gaps = 42/435 (9%)

Query: 4   IFDTTLRDGEQT--PGVSLSPSEKLELAIKLDELGVNIIEAGSAITSKGEREAMKLVTGQ 61
           I DTT RDG+Q   P      +   +L  KL      I  +   + S+ +R A++    +
Sbjct: 53  ITDTTFRDGQQARPPYTVKQMAHMYDLLHKLGGRSGLIRASEFFMYSQKDRRAIEACRAK 112

Query: 62  NLN-AEISSFVRALPVDIDAALSCDVDSVHLVVPTSDIHMTYKLRKSREENLKDAMHAVE 120
                 I+ ++RA   D+  A   + D V ++   SD H+  KL   RE+ L++ +  V 
Sbjct: 113 GYKFPRITGWIRANVDDLKIARDMEFDEVGMLTSVSDYHLYLKLGLDREKALQNYLKVVG 172

Query: 121 YAKDHGLIVELSAEDATRSDVE-FLKELFLKGEELKAD-----RICVCDTVGILTPLKAI 174
            A + G+I     ED TR+D+  F      K  E+  D     +I +CDT+G   P    
Sbjct: 173 QALEWGIIPRCHFEDITRADIPGFCLPFAQKLMEMSKDSGLPVKIRLCDTMGYGVPYPGA 232

Query: 175 DLIKTMKNTIK-------IP---VSIHCHNDFGMATANTLSAISAGADQCHVTINGIGER 224
            L ++++  ++       +P   +  H HNDF     N ++A   G    + T+ G GER
Sbjct: 233 TLPRSVQRIVRAFTDEAGVPGEWLEWHGHNDFHKVLINGVTAWMYGCAGVNCTLLGFGER 292

Query: 225 AGNASLEEVVMSLKSLYDIETGIDTEKLHKISRIVSKYMKIPVPANKALVGDNAFAHEAG 284
            GN  LE +V+   SL   +   +T+ + +I+      +   +P N   VG +  A  AG
Sbjct: 293 TGNTPLEALVIEYISLTGDDDAAETQVISEIAHYFETELDYRIPDNYPFVGKDFNATSAG 352

Query: 285 IHVDGLMKSTETYEPIHPETVGNRR-KIILGKHSGKAALKY------KLEIMN-IGLSHE 336
           IHVDGL K+ E Y       + NR   II+   SG+A + Y       L + N +   H 
Sbjct: 353 IHVDGLAKNEEIYNIFDTRKILNRPVPIIITDKSGRAGVAYWINQYLGLPVENQVSKKHP 412

Query: 337 EFEETYSKI-KAFGD-LGKYISDVDLKTIIN----QVRGVELERKVILDEITVVSGNKVS 390
                Y+KI KA+ D      S+ +++T++     ++ G E       D+I  ++G    
Sbjct: 413 AVGHIYNKIMKAYEDGRNTSFSNKEMQTLVRRFMPELFGSE------FDQIKKMAGEL-- 464

Query: 391 PLASINLKFANDCNI 405
             A + +K A +C I
Sbjct: 465 -SAGLIIKLAKECQI 478