Pairwise Alignments

Query, 413 a.a., CBS domain-containing protein from Methanococcus maripaludis S2

Subject, 664 a.a., diguanylate cyclase with GAF sensor from Synechococcus elongatus PCC 7942

 Score = 49.3 bits (116), Expect = 3e-10
 Identities = 44/190 (23%), Positives = 90/190 (47%), Gaps = 17/190 (8%)

Query: 3   EQVIDIATKDVVTVSPDTPISKAVGTMENK-KFHNLIVEKDDDIY-LVTMHDLLLGNSVH 60
           E+ ID   +  +TV+P  P+++ +  ME +   + L++E +  +  + T  DL+   ++ 
Sbjct: 10  EEAID---RQPLTVAPTLPVAQVLAVMERQHSSYVLLMESNQTLVGIFTERDLVRLTAIG 66

Query: 61  QQVEDLMFRPFCVKMNTQVIDA-AFEMINS-------GQRVAPVIDENDKLIGIITDYDV 112
             +             T + ++  +++I +         R  PV++   +LIGI+T   +
Sbjct: 67  ITITSTPIEEVATSTVTTIQESDIYDVIRTLNLFRQYNVRHLPVVNATHQLIGIMTYEGI 126

Query: 113 MKCAAESELLKDVKIDKIMTKSPVTIDIDESIGKARSLMMKYNIGRLIVLDMD----GKP 168
            +     +LL+  ++ ++M KS +  D  +S      LM    I  +++ + D     KP
Sbjct: 127 RRLLKPIDLLRLRRVSEVMVKSIICADRYQSALSLAKLMSDRLISCVVITEKDPSGFPKP 186

Query: 169 IGMVTEDDIV 178
           IG+VTE DI+
Sbjct: 187 IGLVTERDIL 196



 Score = 40.0 bits (92), Expect = 2e-07
 Identities = 25/103 (24%), Positives = 47/103 (45%), Gaps = 5/103 (4%)

Query: 96  VIDEND-----KLIGIITDYDVMKCAAESELLKDVKIDKIMTKSPVTIDIDESIGKARSL 150
           VI E D     K IG++T+ D++    +   L        M   PV I   +++ +A   
Sbjct: 174 VITEKDPSGFPKPIGLVTERDILHLQVQGADLSQTIAADFMGSPPVFIQASDTLWQANQY 233

Query: 151 MMKYNIGRLIVLDMDGKPIGMVTEDDIVKKVFKPKTKMTVGEL 193
           M    I RL+V+D     +G++T+  ++  +   +  +T+  L
Sbjct: 234 MRARKIRRLLVVDERNIMVGLLTQTSLIHMIDPVEATLTIETL 276