Pairwise Alignments

Query, 413 a.a., CBS domain-containing protein from Methanococcus maripaludis S2

Subject, 909 a.a., CBS from Synechococcus elongatus PCC 7942

 Score = 53.1 bits (126), Expect = 3e-11
 Identities = 38/126 (30%), Positives = 66/126 (52%), Gaps = 4/126 (3%)

Query: 65  DLMFRPF-CVKMNTQVIDAAFEMINSGQRVAPVIDENDKLIGIITDYDVMKCAAESELLK 123
           DLM  P   V+    + +A   ++  G     V+DE D+L+GII+  D+    A      
Sbjct: 319 DLMSSPVRTVRPEIAIAEAERILLRYGHSGLSVVDEQDQLVGIISRRDL--DLALHHGFG 376

Query: 124 DVKIDKIMTKSPVTIDIDESIGKARSLMMKYNIGRLIVLDMDGKPIGMVTEDDIVKKVFK 183
              +   MT  P TI  + S+ +   LM+ Y+IGRL VLD + + +G+VT  D+++++ +
Sbjct: 377 HAPVKGYMTLHPKTIAPETSLPEIEDLMVTYDIGRLPVLDRN-QLVGIVTRTDVLRQLHQ 435

Query: 184 PKTKMT 189
            + + T
Sbjct: 436 DQQRQT 441



 Score = 37.4 bits (85), Expect = 2e-06
 Identities = 35/145 (24%), Positives = 68/145 (46%), Gaps = 18/145 (12%)

Query: 116 AAESELLKDVKIDKIMTKSPV-TIDIDESIGKARSLMMKYNIGRLIVLDMDGKPIGMVTE 174
           AA  E L    + + +  SPV T+  + +I +A  ++++Y    L V+D   + +G+++ 
Sbjct: 305 AAVLEQLPAPLLARDLMSSPVRTVRPEIAIAEAERILLRYGHSGLSVVDEQDQLVGIISR 364

Query: 175 DDIVKKVFKPKTKMTV-GELTGNKVPRMAQPVSMIINKPLITANIGDSVAEVAEILEQQD 233
            D+   +        V G +T +  P+   P +              S+ E+ +++   D
Sbjct: 365 RDLDLALHHGFGHAPVKGYMTLH--PKTIAPET--------------SLPEIEDLMVTYD 408

Query: 234 IRGIPIFKNDTLRGIVTRLDILKYL 258
           I  +P+   + L GIVTR D+L+ L
Sbjct: 409 IGRLPVLDRNQLVGIVTRTDVLRQL 433