Pairwise Alignments

Query, 413 a.a., CBS domain-containing protein from Methanococcus maripaludis S2

Subject, 140 a.a., acetoin utilization protein AcuB, putative (RefSeq) from Shewanella amazonensis SB2B

 Score = 55.5 bits (132), Expect = 9e-13
 Identities = 32/97 (32%), Positives = 60/97 (61%), Gaps = 15/97 (15%)

Query: 95  PVIDENDKLIGIITDYDVMKCAA------------ESELLKDVKIDKIMTKSPVTIDIDE 142
           PV+DE+  L G++++ D+++  +            +  LLK  ++ ++MT+ PVTI   +
Sbjct: 38  PVVDEDGTLSGMLSERDLLRAISPHIGAIGETNRDQETLLK--RVHQVMTREPVTIAPHK 95

Query: 143 SIGKARSLMMKYNIGRLIVLDMDGKPIGMVTEDDIVK 179
           S+  A  LM++Y+IG L VL+ DGK +G++T  D+++
Sbjct: 96  SLDDASLLMLEYSIGSLPVLE-DGKLVGIITWKDLLR 131



 Score = 45.1 bits (105), Expect = 1e-09
 Identities = 30/133 (22%), Positives = 68/133 (51%), Gaps = 3/133 (2%)

Query: 124 DVKIDKIMTKSPVTIDIDESIGKARSLMMKYNIGRLIVLDMDGKPIGMVTEDDIVKKVFK 183
           ++ I  IM    VT+++D+ +   + +  + +   L V+D DG   GM++E D+++ +  
Sbjct: 2   ELSIADIMVTRVVTVEMDDRLQLVKEIFDQASFHHLPVVDEDGTLSGMLSERDLLRAI-S 60

Query: 184 PKTKMTVGELTGNKVPRMAQPVSMIINKPLITANIGDSVAEVAEILEQQDIRGIPIFKND 243
           P     +GE T      + + V  ++ +  +T     S+ + + ++ +  I  +P+ ++ 
Sbjct: 61  PHIG-AIGE-TNRDQETLLKRVHQVMTREPVTIAPHKSLDDASLLMLEYSIGSLPVLEDG 118

Query: 244 TLRGIVTRLDILK 256
            L GI+T  D+L+
Sbjct: 119 KLVGIITWKDLLR 131



 Score = 35.0 bits (79), Expect = 1e-06
 Identities = 34/128 (26%), Positives = 56/128 (43%), Gaps = 19/128 (14%)

Query: 5   VIDIATKDVVTVSPDTPISKAVGTMENKKFHNLIVEKDDDIY--LVTMHDLLLGNSVH-- 60
           + DI    VVTV  D  +       +   FH+L V  +D     +++  DLL   S H  
Sbjct: 5   IADIMVTRVVTVEMDDRLQLVKEIFDQASFHHLPVVDEDGTLSGMLSERDLLRAISPHIG 64

Query: 61  -------------QQVEDLMFR-PFCVKMNTQVIDAAFEMINSGQRVAPVIDENDKLIGI 106
                        ++V  +M R P  +  +  + DA+  M+       PV+ E+ KL+GI
Sbjct: 65  AIGETNRDQETLLKRVHQVMTREPVTIAPHKSLDDASLLMLEYSIGSLPVL-EDGKLVGI 123

Query: 107 ITDYDVMK 114
           IT  D+++
Sbjct: 124 ITWKDLLR 131