Pairwise Alignments

Query, 413 a.a., CBS domain-containing protein from Methanococcus maripaludis S2

Subject, 615 a.a., cyclic nucleotide-binding protein (RefSeq) from Shewanella loihica PV-4

 Score = 63.9 bits (154), Expect = 1e-14
 Identities = 49/168 (29%), Positives = 85/168 (50%), Gaps = 6/168 (3%)

Query: 62  QVEDLMFR-PFCVKMNTQVIDAAFEMINSGQRVAPVIDENDKLIGIITDYDVMKCAAESE 120
           +V  LM + P C+ +N  V DAA  ++   +  + +I +N KL GI+TD D+        
Sbjct: 151 RVSSLMSKQPLCLDINASVSDAA-RLMRDNRVSSVLIIDNQKLAGILTDRDLRNRVLAES 209

Query: 121 LLKDVKIDKIMTKSPVTIDIDESIGKARSLMMKYNIGRLIVLDMDGKPIGMVTEDDIVKK 180
           L   + + + MT +P T+  +  + +A  LM ++NI  L ++D +G PIG++T  DI++ 
Sbjct: 210 LDGSLPVHQAMTVTPTTLSANALVFEAMLLMSQHNIHHLPIMD-EGHPIGVITSTDILRG 268

Query: 181 VFKPKTKMTVGELTGNKVPRMAQPVSMIINKPLITANIGDSVAEVAEI 228
               +  + +GE+           VS  I  PL+  N+  + A   EI
Sbjct: 269 Q-SSQPLLLIGEIERQHDLESLIHVSKQI--PLLLQNLISADARAEEI 313



 Score = 45.4 bits (106), Expect = 5e-09
 Identities = 36/157 (22%), Positives = 70/157 (44%), Gaps = 14/157 (8%)

Query: 120 ELLKDVKIDKIMTKSPVTIDIDESIGKARSLMMKYNIGRLIVLDMDGKPIGMVTEDDIVK 179
           EL    ++  +M+K P+ +DI+ S+  A  LM    +  ++++D + K  G++T+ D+  
Sbjct: 145 ELGSTNRVSSLMSKQPLCLDINASVSDAARLMRDNRVSSVLIID-NQKLAGILTDRDL-- 201

Query: 180 KVFKPKTKMTVGELTGNKVPRMAQPVSMIINKPLITANIGDSVAEVAEILEQQDIRGIPI 239
                + ++    L G      + PV   +     T +    V E   ++ Q +I  +PI
Sbjct: 202 -----RNRVLAESLDG------SLPVHQAMTVTPTTLSANALVFEAMLLMSQHNIHHLPI 250

Query: 240 FKNDTLRGIVTRLDILKYLRDLRAESMVEVEIQGDFD 276
                  G++T  DIL+         + E+E Q D +
Sbjct: 251 MDEGHPIGVITSTDILRGQSSQPLLLIGEIERQHDLE 287