Pairwise Alignments

Query, 413 a.a., CBS domain-containing protein from Methanococcus maripaludis S2

Subject, 279 a.a., CBS domain-containing protein from Methanococcus maripaludis JJ

 Score = 66.6 bits (161), Expect = 8e-16
 Identities = 54/201 (26%), Positives = 96/201 (47%), Gaps = 20/201 (9%)

Query: 1   LKEQVIDIATKDVVTVSPDTPISKAVGTMENKKFHNLIVEKDDDIYLVTMHDLLLGNSVH 60
           + E V +I T +VV +  +  +++ +     KK   + V     + + T+++  +   + 
Sbjct: 80  INEPVKEIMTDNVVLIKENAELNEVIDLYVEKKIGGMPVIDKSGVLITTINERDVIKYLK 139

Query: 61  QQVEDLMFRPFCVKMNT-------QVIDAAFEMINSGQRVAPVIDENDKLIGIITDYDVM 113
            QV++ +    C+  N        ++ D A  M+ +G R  PV+ E +KL+GIIT  D +
Sbjct: 140 DQVDEKLLVKDCMTENVVSATPGERLKDVARTMLRNGFRRLPVVSE-EKLVGIITSTDFV 198

Query: 114 KCAAES-----------ELLKDVKIDKIMTKSPVTIDIDESIGKARSLMMKYNIGRLIVL 162
           K                  + +V+I  IM    V++  D  +  A   M + NIG L V+
Sbjct: 199 KLFGSDWAFNHMKTGNIREITNVRIQDIMKTDIVSVTSDIKLIDAIKKMNELNIGVLPVV 258

Query: 163 DMDGKPIGMVTEDDIVKKVFK 183
           D + K IG++TE DIVK ++K
Sbjct: 259 DGE-KLIGLITEKDIVKCIYK 278



 Score = 44.3 bits (103), Expect = 5e-09
 Identities = 38/164 (23%), Positives = 79/164 (48%), Gaps = 9/164 (5%)

Query: 146 KARSLMMKYNIGRLIVLDMD-GKPIGMVTEDDIVKKVFK-PKTKMTVGELTGNKVPRMAQ 203
           +A ++M K N+ R+ V D   G+  G++T  DIV  +    K  +   +   N +  + +
Sbjct: 23  EALTMMDKENVRRICVADPGTGRVEGILTNMDIVDFLGGGSKYNLVKFKHNHNMLSAINE 82

Query: 204 PVSMIINKPLITANIGDSVAEVAEILEQQDIRGIPIF-KNDTLRGIVTRLDILKYLRD-- 260
           PV  I+   ++       + EV ++  ++ I G+P+  K+  L   +   D++KYL+D  
Sbjct: 83  PVKEIMTDNVVLIKENAELNEVIDLYVEKKIGGMPVIDKSGVLITTINERDVIKYLKDQV 142

Query: 261 ----LRAESMVEVEIQGDFDEDQRELAERILFNEIKKIAIYSKK 300
               L  + M E  +     E  +++A  +L N  +++ + S++
Sbjct: 143 DEKLLVKDCMTENVVSATPGERLKDVARTMLRNGFRRLPVVSEE 186



 Score = 43.5 bits (101), Expect = 8e-09
 Identities = 47/215 (21%), Positives = 100/215 (46%), Gaps = 23/215 (10%)

Query: 51  HDLLLGNSVHQQVEDLMF-RPFCVKMNTQ---VIDAAFEMINSGQRVAPVIDENDKLIGI 106
           H++L  +++++ V+++M      +K N +   VID   E    G    PVID++  LI  
Sbjct: 74  HNML--SAINEPVKEIMTDNVVLIKENAELNEVIDLYVEKKIGGM---PVIDKSGVLITT 128

Query: 107 ITDYDVMKCAAESELLKDVKIDKIMTKSPVTIDIDESIGKARSLMMKYNIGRLIVLDMDG 166
           I + DV+K   + ++ + + +   MT++ V+    E +      M++    RL V+  + 
Sbjct: 129 INERDVIKYLKD-QVDEKLLVKDCMTENVVSATPGERLKDVARTMLRNGFRRLPVVSEE- 186

Query: 167 KPIGMVTEDDIVKK-----VFKPKTKMTVGELTGNKVPRMAQPVSMIINKPLITANIGDS 221
           K +G++T  D VK       F       + E+T  ++         I+   +++      
Sbjct: 187 KLVGIITSTDFVKLFGSDWAFNHMKTGNIREITNVRIQD-------IMKTDIVSVTSDIK 239

Query: 222 VAEVAEILEQQDIRGIPIFKNDTLRGIVTRLDILK 256
           + +  + + + +I  +P+   + L G++T  DI+K
Sbjct: 240 LIDAIKKMNELNIGVLPVVDGEKLIGLITEKDIVK 274



 Score = 43.1 bits (100), Expect = 1e-08
 Identities = 41/195 (21%), Positives = 81/195 (41%), Gaps = 29/195 (14%)

Query: 77  TQVIDAAFEMINSGQRVAPVIDEND-KLIGIITDYDVMKCAAESELLKDVK--------- 126
           T++I+A   M     R   V D    ++ GI+T+ D++           VK         
Sbjct: 19  TKIIEALTMMDKENVRRICVADPGTGRVEGILTNMDIVDFLGGGSKYNLVKFKHNHNMLS 78

Query: 127 -----IDKIMTKSPVTIDIDESIGKARSLMMKYNIGRLIVLDMDGKPIGMVTEDDIVKKV 181
                + +IMT + V I  +  + +   L ++  IG + V+D  G  I  + E D++K +
Sbjct: 79  AINEPVKEIMTDNVVLIKENAELNEVIDLYVEKKIGGMPVIDKSGVLITTINERDVIKYL 138

Query: 182 FKPKTKMTVGELTGNKVPRMAQPVSMIINKPLITANIGDSVAEVAEILEQQDIRGIPIFK 241
                +  +              V   + + +++A  G+ + +VA  + +   R +P+  
Sbjct: 139 KDQVDEKLL--------------VKDCMTENVVSATPGERLKDVARTMLRNGFRRLPVVS 184

Query: 242 NDTLRGIVTRLDILK 256
            + L GI+T  D +K
Sbjct: 185 EEKLVGIITSTDFVK 199